Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37589 | Canola | cytosol, nucleus, peroxisome | 97.77 | 97.77 |
| AT1G80340.1 | Thale cress | cytosol | 86.87 | 89.63 |
| CDX87302 | Canola | cytosol | 19.27 | 89.61 |
| CDY39986 | Canola | cytosol | 31.28 | 89.6 |
| CDX87303 | Canola | cytosol | 36.87 | 75.43 |
| CDY39663 | Canola | cytosol, nucleus, peroxisome | 70.11 | 69.92 |
| CDY36572 | Canola | cytosol, nucleus, peroxisome | 68.99 | 68.8 |
| CDY68965 | Canola | cytosol, nucleus, peroxisome | 67.6 | 67.6 |
| CDX81720 | Canola | cytosol, nucleus, peroxisome | 67.04 | 67.04 |
| KRH09799 | Soybean | cytosol, nucleus, peroxisome | 54.47 | 55.24 |
| KRH23520 | Soybean | cytosol | 53.63 | 54.55 |
| VIT_09s0002g05300.t01 | Wine grape | cytosol | 54.19 | 54.04 |
| VIT_09s0002g05270.t01 | Wine grape | cytosol, nucleus, peroxisome | 55.03 | 53.97 |
| PGSC0003DMT400014555 | Potato | cytosol | 52.79 | 53.09 |
| KRH44397 | Soybean | cytosol | 55.59 | 53.07 |
| Solyc03g119910.2.1 | Tomato | cytosol | 52.51 | 52.96 |
| CDY37588 | Canola | cytosol, nucleus, peroxisome | 51.4 | 52.42 |
| CDY38660 | Canola | cytosol | 51.4 | 52.42 |
| PGSC0003DMT400042582 | Potato | cytosol, nucleus, peroxisome | 53.07 | 51.08 |
| Solyc06g066820.2.1 | Tomato | cytosol, peroxisome, plastid | 53.07 | 50.8 |
| KRH47509 | Soybean | cytosol | 53.63 | 50.79 |
| GSMUA_Achr5P09790_001 | Banana | cytosol | 45.81 | 44.32 |
| CDY31424 | Canola | cytosol | 43.3 | 44.29 |
| CDX76441 | Canola | cytosol | 42.74 | 43.71 |
| GSMUA_Achr7P13240_001 | Banana | cytosol, nucleus, peroxisome | 45.81 | 43.62 |
| GSMUA_Achr4P08970_001 | Banana | cytosol, nucleus, peroxisome | 42.46 | 41.3 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plastid | 41.06 | 41.18 |
| TraesCS3A01G122600.1 | Wheat | cytosol | 37.15 | 35.95 |
| Zm00001d039634_P001 | Maize | cytosol | 37.71 | 35.34 |
| TraesCS3B01G141800.1 | Wheat | cytosol | 36.31 | 35.23 |
| Os01t0177400-01 | Rice | golgi | 36.03 | 34.86 |
| TraesCS3D01G124500.1 | Wheat | cytosol | 35.75 | 34.59 |
| HORVU3Hr1G022840.8 | Barley | cytosol | 36.03 | 34.31 |
| EES00202 | Sorghum | cytosol, peroxisome, plastid | 36.87 | 33.93 |
| TraesCS2A01G540400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 34.36 | 33.24 |
| HORVU2Hr1G118350.1 | Barley | cytosol | 33.8 | 32.1 |
| TraesCS2D01G542100.1 | Wheat | cytosol | 33.24 | 31.9 |
| Os05t0178100-01 | Rice | plasma membrane | 33.8 | 31.76 |
| TraesCS2B01G570900.1 | Wheat | cytosol | 32.12 | 30.67 |
| TraesCS2B01G570800.2 | Wheat | cytosol | 34.92 | 30.56 |
| Zm00001d037627_P001 | Maize | cytosol | 30.45 | 29.14 |
| KXG21453 | Sorghum | cytosol, peroxisome, plastid | 31.56 | 27.49 |
| Os04t0517600-00 | Rice | cytosol, peroxisome | 14.25 | 24.88 |
Protein Annotations
| MapMan:11.6.1.6 | Gene3D:2.60.120.330 | GO:A0A078HM32 | UniProt:A0A078HM32 | EnsemblPlants:CDY38661 | ProteinID:CDY38661 |
| ProteinID:CDY38661.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00066378001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF95 | SUPFAM:SSF51197 | UniParc:UPI0004EE89FF | : | : |
Description
BnaC02g23180DBnaC02g23180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM32]
Coordinates
chrLK032429:-:70761..72429
Molecular Weight (calculated)
40220.2 Da
IEP (calculated)
6.907
GRAVY (calculated)
-0.128
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MHSTLSDVFI SHPIHIPLSN LPDFTSLRHL PDSYTWTPKD DLLFSASSSD ESLPFIDLSD PHVATRVGHA CTTWGAFQIT NHGVPSRLLD DIEFLTGSLF
101: RLPVHRKLKA ARREDGISGY GVARIASFFN KQMWSEGFTV IGSPLDDFHK LWPKQHLKYC KIIQEYEEHM QKLAAKLMWL ALGSLGVEEK DIEWAGPISD
201: FQGAQAAIQL NHYPICPEPD RAMGLAAHTD STLMTILYQN NTAGLQVFRD DVGWITVPPV PGSLVVNLGD LLHILTNGIF PSVLHRARVN HLRSRFSMAY
301: LWGPPSDLMI SPLPKLVDPL HSPLYPSLTW KQYLATKATH FNQSLSFIRN YLSSDQTS
101: RLPVHRKLKA ARREDGISGY GVARIASFFN KQMWSEGFTV IGSPLDDFHK LWPKQHLKYC KIIQEYEEHM QKLAAKLMWL ALGSLGVEEK DIEWAGPISD
201: FQGAQAAIQL NHYPICPEPD RAMGLAAHTD STLMTILYQN NTAGLQVFRD DVGWITVPPV PGSLVVNLGD LLHILTNGIF PSVLHRARVN HLRSRFSMAY
301: LWGPPSDLMI SPLPKLVDPL HSPLYPSLTW KQYLATKATH FNQSLSFIRN YLSSDQTS
001: MSSTLSDVFR SHPIHIPLSN PPDFKSLPDS YTWTPKDDLL FSASASDETL PLIDLSDIHV ATLVGHACTT WGAFQITNHG VPSRLLDDIE FLTGSLFRLP
101: VQRKLKAARS ENGVSGYGVA RIASFFNKKM WSEGFTVIGS PLHDFRKLWP SHHLKYCEII EEYEEHMQKL AAKLMWFALG SLGVEEKDIQ WAGPNSDFQG
201: TQAVIQLNHY PKCPEPDRAM GLAAHTDSTL MTILYQNNTA GLQVFRDDVG WVTAPPVPGS LVVNVGDLLH ILTNGIFPSV LHRARVNHVR SRFSMAYLWG
301: PPSDIMISPL PKLVDPLQSP LYPSLTWKQY LATKATHFNQ SLSIIRN
101: VQRKLKAARS ENGVSGYGVA RIASFFNKKM WSEGFTVIGS PLHDFRKLWP SHHLKYCEII EEYEEHMQKL AAKLMWFALG SLGVEEKDIQ WAGPNSDFQG
201: TQAVIQLNHY PKCPEPDRAM GLAAHTDSTL MTILYQNNTA GLQVFRDDVG WVTAPPVPGS LVVNVGDLLH ILTNGIFPSV LHRARVNHVR SRFSMAYLWG
301: PPSDIMISPL PKLVDPLQSP LYPSLTWKQY LATKATHFNQ SLSIIRN
Arabidopsis Description
GA3OX2Gibberellin 3-beta-dioxygenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.