CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44397	Soybean	cytosol	91.27	92.0
KRH09799	Soybean	cytosol, nucleus, peroxisome	67.46	72.24
KRH23520	Soybean	cytosol	66.67	71.59
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	60.58	62.74
Solyc03g119910.2.1	Tomato	cytosol	56.88	60.56
PGSC0003DMT400014555	Potato	cytosol	56.35	59.83
CDX87302	Canola	cytosol	12.17	59.74
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	57.14	57.75
CDY39663	Canola	cytosol, nucleus, peroxisome	54.76	57.66
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	54.5	57.38
CDX81720	Canola	cytosol, nucleus, peroxisome	54.23	57.26
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	54.23	57.26
AT1G15550.1	Thale cress	cytosol, nucleus, peroxisome	54.23	57.26
CDY68965	Canola	cytosol, nucleus, peroxisome	54.23	57.26
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	56.35	57.26
CDY36572	Canola	cytosol, nucleus, peroxisome	54.23	57.1
VIT_09s0002g05300.t01	Wine grape	cytosol	53.44	56.27
CDY39986	Canola	cytosol	17.99	54.4
Bra008480.1-P	Field mustard	cytosol, nucleus, peroxisome	51.32	54.19
AT1G80340.1	Thale cress	cytosol	49.74	54.18
CDY38661	Canola	cytosol, nucleus, peroxisome	50.79	53.63
CDY37589	Canola	cytosol, nucleus, peroxisome	50.79	53.63
Bra008481.1-P	Field mustard	cytosol	48.15	51.85
CDY37588	Canola	cytosol, nucleus, peroxisome	47.62	51.28
CDY38660	Canola	cytosol	47.35	51.0
GSMUA_Achr5P09790_001	Banana	cytosol	48.94	50.0
AT1G80330.1	Thale cress	cytosol	46.83	49.86
CDX87303	Canola	cytosol	22.75	49.14
KRH61843	Soybean	cytosol, peroxisome, plastid	43.65	48.39
KRH52518	Soybean	cytosol	43.39	47.26
KRH05073	Soybean	cytosol	43.39	46.86
KRH16040	Soybean	cytosol	42.59	46.4
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	46.03	46.28
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	41.27	43.7
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	42.06	43.21
TraesCS3B01G141800.1	Wheat	cytosol	35.45	36.31
Zm00001d039634_P001	Maize	cytosol	36.51	36.13
Os01t0177400-01	Rice	golgi	35.19	35.95
TraesCS3D01G124500.1	Wheat	cytosol	34.92	35.68
TraesCS3A01G122600.1	Wheat	cytosol	34.92	35.68
HORVU3Hr1G022840.8	Barley	cytosol	34.92	35.11
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.6	34.32
EES00202	Sorghum	cytosol, peroxisome, plastid	34.92	33.93
TraesCS2D01G542100.1	Wheat	cytosol	33.33	33.78
TraesCS2B01G570900.1	Wheat	cytosol	33.07	33.33
HORVU2Hr1G118350.1	Barley	cytosol	31.48	31.57
Zm00001d037627_P001	Maize	cytosol	30.95	31.28
Os05t0178100-01	Rice	plasma membrane	31.48	31.23
TraesCS2B01G570800.2	Wheat	cytosol	32.54	30.07
KXG21453	Sorghum	cytosol, peroxisome, plastid	31.22	28.71
Os04t0517600-00	Rice	cytosol, peroxisome	14.02	25.85

Protein Annotations

EntrezGene:100795921	MapMan:11.6.1.6	Gene3D:2.60.120.330	EMBL:ACUP02004153	InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_07G033800
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006629	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009686
GO:GO:0009719	GO:GO:0009740	GO:GO:0009987	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872
GO:GO:0055114	UniProt:I1KH57	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH47509
ProteinID:KRH47509	ProteinID:KRH47509.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI000233821C	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:2644384..2646637

Molecular Weight (calculated)

42077.5 Da

IEP (calculated)

7.950

GRAVY (calculated)

-0.147

Length

378 amino acids

Sequence
(BLAST)

001: MPSLSEAFRG HPVYLHHKHS DFNSLQELPD SYSWTQPHDH HLPNYPSNNK TKIFVPVIDL NHPNAPNLIG HACKTWGVFQ VVNHDIPMSL FSDIQRASLA
101: LFSLPLHQKL KAARSPDGVS GYGRARISSF FPKLMWSECF TILDSPLDLF LKLWPQDYAK YCDIVVEYEA AMKKLAAKLM CLMLASLGIT KEDTKWAGPK
201: GEFNGACAAL HLNSYPSCPD PDRAMGLAAH TDSTLLTILH QNNVNGLQVL KEGEGWVAVP PLHGGLVINV GDLLHILSNG LYPSVLHRVR VNRTQQRFSV
301: AYLYGPPANV QISPHVKLVG PTRPALYRPV TWNEYLGTKA NLFNKALSAV RLSASINGLF DINEDQNNDF QVGFNLDI

Best Arabidopsis Sequence Match ( AT1G15550.1 )
(BLAST)

001: MPAMLTDVFR GHPIHLPHSH IPDFTSLREL PDSYKWTPKD DLLFSAAPSP PATGENIPLI DLDHPDATNQ IGHACRTWGA FQISNHGVPL GLLQDIEFLT
101: GSLFGLPVQR KLKSARSETG VSGYGVARIA SFFNKQMWSE GFTITGSPLN DFRKLWPQHH LNYCDIVEEY EEHMKKLASK LMWLALNSLG VSEEDIEWAS
201: LSSDLNWAQA ALQLNHYPVC PEPDRAMGLA AHTDSTLLTI LYQNNTAGLQ VFRDDLGWVT VPPFPGSLVV NVGDLFHILS NGLFKSVLHR ARVNQTRARL
301: SVAFLWGPQS DIKISPVPKL VSPVESPLYQ SVTWKEYLRT KATHFNKALS MIRNHREE

Arabidopsis Description

GA3OX1Gibberellin 3-beta-dioxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q39103]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.