Factsheet for Bra008480.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37589	Canola	cytosol, nucleus, peroxisome	97.77	97.77
AT1G80340.1	Thale cress	cytosol	84.64	87.32
Bra026122.1-P	Field mustard	cytosol, nucleus, peroxisome	69.83	69.64
Bra026757.1-P	Field mustard	cytosol, nucleus, peroxisome	68.16	68.16
KRH09799	Soybean	cytosol, nucleus, peroxisome	54.75	55.52
KRH23520	Soybean	cytosol	53.91	54.83
VIT_09s0002g05270.t01	Wine grape	cytosol, nucleus, peroxisome	54.75	53.7
VIT_09s0002g05300.t01	Wine grape	cytosol	53.63	53.48
KRH44397	Soybean	cytosol	55.87	53.33
PGSC0003DMT400014555	Potato	cytosol	52.79	53.09
Bra008481.1-P	Field mustard	cytosol	51.96	52.99
Solyc03g119910.2.1	Tomato	cytosol	52.23	52.68
KRH47509	Soybean	cytosol	54.19	51.32
PGSC0003DMT400042582	Potato	cytosol, nucleus, peroxisome	52.79	50.81
Solyc06g066820.2.1	Tomato	cytosol, peroxisome, plastid	52.51	50.27
GSMUA_Achr5P09790_001	Banana	cytosol	46.65	45.14
GSMUA_Achr7P13240_001	Banana	cytosol, nucleus, peroxisome	46.09	43.88
Bra020909.1-P	Field mustard	cytosol	42.74	43.71
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	41.34	41.46
GSMUA_Achr4P08970_001	Banana	cytosol, nucleus, peroxisome	42.46	41.3
TraesCS3A01G122600.1	Wheat	cytosol	37.15	35.95
Zm00001d039634_P001	Maize	cytosol	37.99	35.6
Os01t0177400-01	Rice	golgi	36.59	35.41
TraesCS3B01G141800.1	Wheat	cytosol	36.31	35.23
TraesCS3D01G124500.1	Wheat	cytosol	36.31	35.14
HORVU3Hr1G022840.8	Barley	cytosol	36.87	35.11
EES00202	Sorghum	cytosol, peroxisome, plastid	36.87	33.93
TraesCS2A01G540400.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	34.08	32.97
Os05t0178100-01	Rice	plasma membrane	34.36	32.28
HORVU2Hr1G118350.1	Barley	cytosol	33.8	32.1
TraesCS2D01G542100.1	Wheat	cytosol	32.96	31.64
TraesCS2B01G570900.1	Wheat	cytosol	32.96	31.47
TraesCS2B01G570800.2	Wheat	cytosol	34.64	30.32
Zm00001d037627_P001	Maize	cytosol	30.45	29.14
KXG21453	Sorghum	cytosol, peroxisome, plastid	31.28	27.25
Os04t0517600-00	Rice	cytosol, peroxisome	13.97	24.39

Protein Annotations

MapMan:11.6.1.6	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra008480	EnsemblPlants:Bra008480.1	EnsemblPlants:Bra008480.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628
GO:GO:0009639	GO:GO:0010114	GO:GO:0016491	GO:GO:0016707	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4CW83	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF95	SUPFAM:SSF51197	UniParc:UPI0002546C49

Description

AT1G80340 (E=7e-186) GA4H, ATGA3OX2, GA3OX2 | GA3OX2 (GIBBERELLIN 3-OXIDASE 2); gibberellin 3-beta-dioxygenase

Coordinates

chrA02:+:15899133..15900727

Molecular Weight (calculated)

40172.1 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.111

Length

358 amino acids

Sequence
(BLAST)

001: MHSTLSDVFI SHPIHIPLSN SPDFTSLRHL PDSYTWTPKD DLLFSASSSD ESLPFIDLSD PHVATRVGHA CTTWGAFQIT NHGVPSRLLD DIEFLTGSLF
101: QLPVHRKLKA ARREDGISGY GVARIASFFN KQMWSEGFTV IGSPLDDFHK LWPRQHLKYC KIIQEYEEHM QKLAAKLMWL ALGALGVEEK DIEWAGPISD
201: FQGAQAAIQL NHYPICPEPD RAMGLAAHTD STLLTILYQN NTAGLQIFRD DVGWITVPPV PGSLVVNVGD LLHILTNGIF PSVLHRARVN HLRSRFSMAY
301: LWGPPSDLMI SPLPKLVDPL HSPLYPSLTW KQYLATKATH FNQSLSFIRN YLSSDQIS

Best Arabidopsis Sequence Match ( AT1G80340.1 )
(BLAST)

001: MSSTLSDVFR SHPIHIPLSN PPDFKSLPDS YTWTPKDDLL FSASASDETL PLIDLSDIHV ATLVGHACTT WGAFQITNHG VPSRLLDDIE FLTGSLFRLP
101: VQRKLKAARS ENGVSGYGVA RIASFFNKKM WSEGFTVIGS PLHDFRKLWP SHHLKYCEII EEYEEHMQKL AAKLMWFALG SLGVEEKDIQ WAGPNSDFQG
201: TQAVIQLNHY PKCPEPDRAM GLAAHTDSTL MTILYQNNTA GLQVFRDDVG WVTAPPVPGS LVVNVGDLLH ILTNGIFPSV LHRARVNHVR SRFSMAYLWG
301: PPSDIMISPL PKLVDPLQSP LYPSLTWKQY LATKATHFNQ SLSIIRN

Arabidopsis Description

GA3OX2Gibberellin 3-beta-dioxygenase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZT84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.