Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g114840.2.1 | Tomato | nucleus | 69.6 | 70.73 |
| Solyc04g005320.2.1 | Tomato | nucleus | 60.0 | 63.03 |
| Solyc05g012020.2.1 | Tomato | nucleus | 57.6 | 59.5 |
| Solyc02g089200.2.1 | Tomato | nucleus | 58.0 | 58.94 |
| Solyc05g015750.2.1 | Tomato | nucleus | 55.2 | 57.26 |
| Zm00001d034047_P007 | Maize | nucleus | 54.0 | 56.25 |
| KXG37536 | Sorghum | nucleus | 54.0 | 56.02 |
| Os03t0753100-01 | Rice | nucleus | 52.4 | 54.81 |
| TraesCS5D01G401700.1 | Wheat | nucleus | 50.0 | 52.97 |
| HORVU5Hr1G095710.1 | Barley | nucleus | 49.6 | 52.32 |
| TraesCS5B01G396700.1 | Wheat | nucleus | 49.2 | 52.12 |
| TraesCS5A01G391800.1 | Wheat | nucleus | 49.6 | 52.1 |
| Solyc01g093960.2.1 | Tomato | nucleus | 48.0 | 47.62 |
| Solyc02g065730.1.1 | Tomato | nucleus | 42.0 | 44.87 |
| Solyc06g069430.2.1 | Tomato | nucleus | 43.6 | 44.49 |
| Solyc03g114830.2.1 | Tomato | nucleus | 43.6 | 44.13 |
| Solyc02g089210.2.1 | Tomato | nucleus | 43.2 | 43.2 |
| Solyc03g019710.2.1 | Tomato | nucleus | 29.2 | 41.24 |
| Solyc05g056620.1.1 | Tomato | nucleus | 39.6 | 40.57 |
| Solyc11g028020.1.1 | Tomato | nucleus | 34.4 | 38.56 |
| Solyc02g091550.1.1 | Tomato | nucleus | 34.8 | 37.02 |
| Solyc02g071730.2.1 | Tomato | nucleus | 33.2 | 33.47 |
| Solyc07g055920.2.1 | Tomato | nucleus | 34.8 | 32.58 |
| Solyc01g106170.2.1 | Tomato | mitochondrion | 19.2 | 32.43 |
| Solyc06g064840.2.1 | Tomato | nucleus | 19.6 | 24.38 |
| Solyc04g076700.2.1 | Tomato | nucleus | 12.0 | 22.73 |
| Solyc12g088090.1.1 | Tomato | nucleus | 18.8 | 21.17 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ncoils:Coil | GO:GO:0000977 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR002487 | InterPro:IPR036879 | UniProt:K4DEK0 | EMBL:KF718834 | InterPro:MADS_MEF2-like | PFAM:PF00319 |
| PFAM:PF01486 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PFscan:PS51297 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF274 | SMART:SM00432 | SUPFAM:SSF55455 | EnsemblPlantsGene:Solyc12g038510.1 | EnsemblPlants:Solyc12g038510.1.1 | InterPro:TF_Kbox |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000276A4D0 | SEG:seg | : | : |
Description
J2MADS-box protein J2 [Source:UniProtKB/Swiss-Prot;Acc:K4DEK0]
Coordinates
chr12:+:47425576..47437387
Molecular Weight (calculated)
28444.1 Da
IEP (calculated)
9.257
GRAVY (calculated)
-0.633
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSILCD AEVALIIFSS RGKLYEFSSA SSMMTTLEKY QQCSYASLDP MLPVSDTQMN YNEYVRLKAR
101: VELLQRSQRH ILGEDLGTLN SKELEQLEHQ LDASLKKVRS KKTQSMLDQL ADLQEKEQML EEANKQLKNK LEESAARIPL GLSWGNNGGQ TMEYNRLPPQ
201: TTAQPFFQPL RLNSSSPQFG YNPNMGANDH EVNAATTAHN INGFIPGWML
101: VELLQRSQRH ILGEDLGTLN SKELEQLEHQ LDASLKKVRS KKTQSMLDQL ADLQEKEQML EEANKQLKNK LEESAARIPL GLSWGNNGGQ TMEYNRLPPQ
201: TTAQPFFQPL RLNSSSPQFG YNPNMGANDH EVNAATTAHN INGFIPGWML
001: MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALLIFSN RGKLYEFCSS PSGMARTVDK YRKHSYATMD PNQSAKDLQD KYQDYLKLKS
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
101: RVEILQHSQR HLLGEELSEM DVNELEHLER QVDASLRQIR STKARSMLDQ LSDLKTKEEM LLETNRDLRR KLEDSDAALT QSFWGSSAAE QQQQHQQQQQ
201: GMSSYQSNPP IQEAGFFKPL QGNVALQMSS HYNHNPANAT NSATTSQNVN GFFPGWMV
Arabidopsis Description
AGL3Agamous-like MADS-box protein AGL3 [Source:UniProtKB/Swiss-Prot;Acc:P29383]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.