Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plasma membrane 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G045710.1 | Barley | extracellular | 15.83 | 91.67 |
| TraesCS5A01G430300.1 | Wheat | plasma membrane | 42.21 | 88.89 |
| TraesCS3A01G188100.1 | Wheat | peroxisome, plasma membrane, vacuole | 36.93 | 88.0 |
| TraesCS2A01G266300.1 | Wheat | plasma membrane | 41.01 | 87.69 |
| TraesCS5A01G502900.1 | Wheat | plasma membrane | 41.01 | 87.69 |
| BAC19890 | Rice | mitochondrion | 83.45 | 87.66 |
| GRMZM5G884707_P01 | Maize | mitochondrion, plasma membrane | 81.3 | 87.37 |
| TraesCS7A01G237900.1 | Wheat | mitochondrion | 71.46 | 84.9 |
| AT2G07727.1 | Thale cress | mitochondrion, plasma membrane | 79.14 | 83.97 |
| ATMG00220.1 | Thale cress | mitochondrion, plasma membrane | 79.14 | 83.97 |
| TraesCS1A01G112900.1 | Wheat | mitochondrion | 74.34 | 83.11 |
| KRH57909 | Soybean | mitochondrion | 64.03 | 72.95 |
| Solyc09g050020.1.1 | Tomato | nucleus | 62.59 | 71.7 |
| TraesCS1A01G130200.1 | Wheat | mitochondrion | 8.15 | 23.78 |
| TraesCS6A01G192500.1 | Wheat | plasma membrane | 11.03 | 19.83 |
Protein Annotations
| Gene3D:1.20.810.10 | MapMan:2.4.3.1 | InterPro:Cyt_b/b6_C | InterPro:Cyt_b/b6_C_sf | InterPro:Cyt_b/b6_N | InterPro:Cytb/b6-like_sf |
| InterPro:Cytochrome_b | InterPro:Di-haem_cyt_TM | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0006122 | GO:GO:0006139 | GO:GO:0008121 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0022904 | GO:GO:0045275 | InterPro:IPR005797 | InterPro:IPR005798 | InterPro:IPR027387 | PFAM:PF00032 |
| PFAM:PF00033 | PIRSF:PIRSF038885 | PFscan:PS51002 | PFscan:PS51003 | PANTHER:PTHR19271 | SUPFAM:SSF81342 |
| SUPFAM:SSF81648 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G150300 | EnsemblPlants:TraesCS4A01G150300.1 | TIGR:cd00284 | TIGR:cd00290 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:295167435..295168725
Molecular Weight (calculated)
46499.1 Da
IEP (calculated)
8.580
GRAVY (calculated)
0.439
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIRNQRLSL LKQHIYSTLN HHLIDYPTPS NLSYWWGVGL LAGICLVIKI VTGVFLAVHD TPHVDLAFNN VEHIMRYVEG GWLLRYMHAN GASMFLIVVH
101: LHIFRGLYHA SYSSPREFVR CLGVFIFLLM IVTTFIGYVP PWGQMSFWGE TVITSLASAI TVVGDTIVTW LWGGFSVDNA TLNRFISVHH LHPLILVGAS
201: LLHLAALHQC GSNNPLGVHS EMDKIVGYLL LSFFPFGFFF APNVLGHPDN YIPANPMPTP PHIVPECYFL PIHSILRSIP DKAGGVAAIA PVFISLLALP
301: FLKEMYVRSS SFRPIHQGIF WLLLADCLLL GWIGCQPMEA PFVTIGQIPS IFFFLFFAIT PIPGRVGRGI PKYYTDETHH TRSFSPFGHS HIMNRTISPF
401: GHSHRRSFSS GAGGGAT
101: LHIFRGLYHA SYSSPREFVR CLGVFIFLLM IVTTFIGYVP PWGQMSFWGE TVITSLASAI TVVGDTIVTW LWGGFSVDNA TLNRFISVHH LHPLILVGAS
201: LLHLAALHQC GSNNPLGVHS EMDKIVGYLL LSFFPFGFFF APNVLGHPDN YIPANPMPTP PHIVPECYFL PIHSILRSIP DKAGGVAAIA PVFISLLALP
301: FLKEMYVRSS SFRPIHQGIF WLLLADCLLL GWIGCQPMEA PFVTIGQIPS IFFFLFFAIT PIPGRVGRGI PKYYTDETHH TRSFSPFGHS HIMNRTISPF
401: GHSHRRSFSS GAGGGAT
001: MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFLIVVY
101: LHIFRGLYHA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPFILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIHAILRS IPDKAGGVAA
301: IAPVFICLLA LPFFKSMYVR SSSFRPIHQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SPLVFFLFFA ITPILGRVGR GIPNSYTDET DHT
101: LHIFRGLYHA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPFILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIHAILRS IPDKAGGVAA
301: IAPVFICLLA LPFFKSMYVR SSSFRPIHQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SPLVFFLFFA ITPILGRVGR GIPNSYTDET DHT
Arabidopsis Description
Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal [Source:TAIR;Acc:AT2G07727]
SUBAcon: [mitochondrion,plasma membrane]
SUBAcon: [mitochondrion,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.