Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- golgi 1
- plasma membrane 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G502900.1 | Wheat | plasma membrane | 91.92 | 93.33 |
| TraesCS2A01G266300.1 | Wheat | plasma membrane | 88.38 | 89.74 |
| TraesCS3A01G188100.1 | Wheat | peroxisome, plasma membrane, vacuole | 67.17 | 76.0 |
| HORVU3Hr1G045040.1 | Barley | cytosol | 74.75 | 69.81 |
| TraesCS7A01G237900.1 | Wheat | mitochondrion | 92.42 | 52.14 |
| Solyc09g050020.1.1 | Tomato | nucleus | 91.92 | 50.0 |
| TraesCS7D01G239000.1 | Wheat | mitochondrion | 94.44 | 49.73 |
| GRMZM5G884707_P01 | Maize | mitochondrion, plasma membrane | 94.95 | 48.45 |
| BAC19890 | Rice | mitochondrion | 95.45 | 47.61 |
| AT2G07727.1 | Thale cress | mitochondrion, plasma membrane | 92.93 | 46.82 |
| ATMG00220.1 | Thale cress | mitochondrion, plasma membrane | 92.93 | 46.82 |
| TraesCS1A01G112900.1 | Wheat | mitochondrion | 81.31 | 43.16 |
| TraesCS4A01G150300.1 | Wheat | mitochondrion, plasma membrane | 88.89 | 42.21 |
| KRH57909 | Soybean | mitochondrion | 72.22 | 39.07 |
| TraesCS1A01G130200.1 | Wheat | mitochondrion | 15.15 | 20.98 |
| TraesCS6A01G192500.1 | Wheat | plasma membrane | 21.72 | 18.53 |
Protein Annotations
| Gene3D:1.20.810.10 | MapMan:35.1 | InterPro:Cyt_b/b6_N | InterPro:Cytb/b6-like_sf | InterPro:Di-haem_cyt_TM | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0022904 | InterPro:IPR005797 | InterPro:IPR027387 |
| PFAM:PF00033 | PFscan:PS51002 | PANTHER:PTHR19271 | PANTHER:PTHR19271:SF5 | SUPFAM:SSF81342 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS5A01G430300 | EnsemblPlants:TraesCS5A01G430300.1 | TIGR:cd00284 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:+:614334023..614334619
Molecular Weight (calculated)
22537.7 Da
IEP (calculated)
8.291
GRAVY (calculated)
0.567
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MTIRNQRFSL LKQPIYSTLN QHLIDYPTPS NLSYWWGFGL LAGICLVIQI VTGVFLAMHH TPHVDLAFNS IEHIMRDVEG GWLLRYMHAN GASMFLIVVH
101: LHIFRGLYHA SYSSPREFFR CLGVVIFLLM IVTAFIGYVP PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNHFFSLHH LLHLKSFF
101: LHIFRGLYHA SYSSPREFFR CLGVVIFLLM IVTAFIGYVP PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNHFFSLHH LLHLKSFF
001: MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGTMILSVL SSPALVSGLM VARAKNLVHS VLFPIPIFFS INQLFHYFCR LPIIKHLATK
101: CQLLLFLISH FLLLLVLTKL VLDLGGYLFM DDLSRALSQF VPGFSGGLGG GSNTPPNPSG DFFLSSYQTS DPDYHDQRRG DSYFSSAPGV QETHRHASGS
201: STNLHLNLND QSQDPIFLEV ERLSLKCDKV KEKTILKTQS LLLERGYHIP DERDIERAIN VVMTEHETID IDRRRKRFYY LYSCLGKTGN KFWMELLETL
301: ADYNINIKSD SDN
101: CQLLLFLISH FLLLLVLTKL VLDLGGYLFM DDLSRALSQF VPGFSGGLGG GSNTPPNPSG DFFLSSYQTS DPDYHDQRRG DSYFSSAPGV QETHRHASGS
201: STNLHLNLND QSQDPIFLEV ERLSLKCDKV KEKTILKTQS LLLERGYHIP DERDIERAIN VVMTEHETID IDRRRKRFYY LYSCLGKTGN KFWMELLETL
301: ADYNINIKSD SDN
Arabidopsis Description
ORF313Uncharacterized mitochondrial cytochrome b-like protein AtMg00590 [Source:UniProtKB/Swiss-Prot;Acc:P93314]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.