Factsheet for HORVU3Hr1G045040.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075540.3
HORVU2Hr1G071350.1
HORVU2Hr1G076650.1
HORVU3Hr1G019540.2
HORVU3Hr1G098650.1
HORVU5Hr1G109620.2
HORVU6Hr1G051210.7
HORVU7Hr1G058850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATMG00220.1	HORVU1Hr1G075540.3	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G019540.2	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT3G27240.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT3G27240.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT3G46430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT4G32470.1	18189341
ATMG00220.1	HORVU2Hr1G071350.1	AT5G13430.1	18189341
ATMG00220.1	HORVU6Hr1G051210.7	AT5G13430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT5G25450.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT5G40810.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT5G40810.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT5G59613.1	18189341

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G430300.1	Wheat	plasma membrane	69.81	74.75
HORVU1Hr1G045710.1	Barley	extracellular	19.81	58.33
HORVU5Hr1G072320.1	Barley	golgi, mitochondrion, plasma membrane	69.34	58.1
HORVU0Hr1G034150.1	Barley	golgi, mitochondrion, plasma membrane	71.7	53.52
HORVU1Hr1G009360.1	Barley	plasma membrane	71.23	50.84
HORVU7Hr1G044370.1	Barley	plasma membrane	69.34	49.49
GSMUA_AchrUn_...	Banana	plasma membrane	61.32	49.24
TraesCS7D01G239000.1	Wheat	mitochondrion	70.75	39.89
Solyc09g050020.1.1	Tomato	nucleus	67.45	39.29
GRMZM5G884707_P01	Maize	mitochondrion, plasma membrane	71.7	39.18
BAC19890	Rice	mitochondrion	72.17	38.54
BAV58143	Barley	mitochondrion, plasma membrane	71.7	38.19
VIT_03s0110g00200.t01	Wine grape	cytosol	25.94	37.67
AT2G07727.1	Thale cress	mitochondrion, plasma membrane	69.34	37.4
ATMG00220.1	Thale cress	mitochondrion, plasma membrane	69.34	37.4
HORVU3Hr1G040840.1	Barley	plasma membrane	53.3	33.14
KRH57909	Soybean	mitochondrion	57.08	33.06
HORVU0Hr1G037920.1	Barley	plasma membrane	15.57	18.23
HORVU5Hr1G065020.1	Barley	golgi, mitochondrion, plasma membrane	17.45	15.95
HORVU6Hr1G049420.1	Barley	mitochondrion	17.45	15.95
AGP50784	Barley	plastid	17.45	15.95
HORVU1Hr1G003510.1	Barley	extracellular, mitochondrion, peroxisome	8.96	15.2
HORVU2Hr1G062090.1	Barley	plasma membrane	16.51	15.09
HORVU1Hr1G063040.1	Barley	plastid	10.38	12.79
HORVU7Hr1G052180.1	Barley	plastid	10.38	12.79
HORVU6Hr1G049430.1	Barley	endoplasmic reticulum, vacuole	3.3	5.04
HORVU0Hr1G034350.1	Barley	endoplasmic reticulum, vacuole	3.3	5.04

Protein Annotations

Gene3D:1.20.810.10	MapMan:35.1	UniProt:A0A287KXJ1	InterPro:Cyt_b/b6_N	InterPro:Cytb/b6-like_sf	InterPro:Di-haem_cyt_TM
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0022904
EnsemblPlantsGene:HORVU3Hr1G045040	EnsemblPlants:HORVU3Hr1G045040.1	InterPro:IPR005797	InterPro:IPR027387	PFAM:PF00033	PFscan:PS51002
PANTHER:PTHR19271	SUPFAM:SSF81342	TMHMM:TMhelix	UniParc:UPI000B488A96	:	:

Description

No Description!

Coordinates

chrchr3H:-:293721515..293722706

Molecular Weight (calculated)

24517.6 Da

IEP (calculated)

8.235

GRAVY (calculated)

0.270

Length

212 amino acids

Sequence
(BLAST)

001: MTIRNQRFSL LEQPIYSTLN QHFIDYPTTS NLRYWCGFGS LPVSFFSHSD SDWRFLAMHH TPHVDLAFNS VEHIMRDVDG GWFLRYMHTN GASMFIIVVH
101: LHTFRGLYHT SHSSRREFVW CLGVVILLLM IVTTFIGYVP PWGQMSFWGV SVITSFANAI PVVGDTIVTW LWGGFSMDNA TLNRFLVYII YSPYFSRCQC
201: SSYGRIASIC IK

Best Arabidopsis Sequence Match ( AT2G07727.1 )
(BLAST)

001: MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFLIVVY
101: LHIFRGLYHA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPFILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIHAILRS IPDKAGGVAA
301: IAPVFICLLA LPFFKSMYVR SSSFRPIHQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SPLVFFLFFA ITPILGRVGR GIPNSYTDET DHT

Arabidopsis Description

Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal [Source:TAIR;Acc:AT2G07727]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.