Factsheet for HORVU1Hr1G045710.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 3
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
TargetP:	secretory
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075540.3
HORVU2Hr1G071350.1
HORVU2Hr1G076650.1
HORVU3Hr1G019540.2
HORVU3Hr1G098650.1
HORVU5Hr1G109620.2
HORVU6Hr1G051210.7
HORVU7Hr1G058850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATMG00220.1	HORVU1Hr1G075540.3	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G019540.2	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT3G27240.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT3G27240.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT3G46430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT4G32470.1	18189341
ATMG00220.1	HORVU2Hr1G071350.1	AT5G13430.1	18189341
ATMG00220.1	HORVU6Hr1G051210.7	AT5G13430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT5G25450.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT5G40810.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT5G40810.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT5G59613.1	18189341

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G072320.1	Barley	golgi, mitochondrion, plasma membrane	97.22	27.67
HORVU0Hr1G034150.1	Barley	golgi, mitochondrion, plasma membrane	98.61	25.0
HORVU7Hr1G044370.1	Barley	plasma membrane	98.61	23.91
HORVU1Hr1G009360.1	Barley	plasma membrane	97.22	23.57
HORVU3Hr1G040840.1	Barley	plasma membrane	98.61	20.82
HORVU3Hr1G045040.1	Barley	cytosol	58.33	19.81
GRMZM5G884707_P01	Maize	mitochondrion, plasma membrane	97.22	18.04
BAC19890	Rice	mitochondrion	98.61	17.88
BAV58143	Barley	mitochondrion, plasma membrane	98.61	17.84
KRH57909	Soybean	mitochondrion	90.28	17.76
AT2G07727.1	Thale cress	mitochondrion, plasma membrane	95.83	17.56
ATMG00220.1	Thale cress	mitochondrion, plasma membrane	95.83	17.56
Solyc09g050020.1.1	Tomato	nucleus	86.11	17.03
TraesCS4A01G150300.1	Wheat	mitochondrion, plasma membrane	91.67	15.83
HORVU1Hr1G063040.1	Barley	plastid	36.11	15.12
HORVU7Hr1G052180.1	Barley	plastid	36.11	15.12
TraesCS1A01G112900.1	Wheat	mitochondrion	77.78	15.01
GSMUA_AchrUn_...	Banana	plasma membrane	48.61	13.26
AGP50784	Barley	plastid	36.11	11.21
HORVU5Hr1G065020.1	Barley	golgi, mitochondrion, plasma membrane	36.11	11.21
HORVU6Hr1G049420.1	Barley	mitochondrion	36.11	11.21
HORVU2Hr1G062090.1	Barley	plasma membrane	34.72	10.78
HORVU0Hr1G037920.1	Barley	plasma membrane	20.83	8.29
HORVU6Hr1G049430.1	Barley	endoplasmic reticulum, vacuole	9.72	5.04
HORVU0Hr1G034350.1	Barley	endoplasmic reticulum, vacuole	9.72	5.04
VIT_03s0110g00200.t01	Wine grape	cytosol	8.33	4.11
HORVU1Hr1G003510.1	Barley	extracellular, mitochondrion, peroxisome	5.56	3.2

Protein Annotations

Gene3D:1.20.810.10	MapMan:35.1	UniProt:A0A287FDV0	InterPro:Cyt_b/b6_N	InterPro:Cytb/b6-like_sf	InterPro:Di-haem_cyt_TM
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0022904
EnsemblPlantsGene:HORVU1Hr1G045710	EnsemblPlants:HORVU1Hr1G045710.1	InterPro:IPR005797	InterPro:IPR027387	PFAM:PF00033	PFscan:PS51002
PANTHER:PTHR19271	SUPFAM:SSF81342	TMHMM:TMhelix	UniParc:UPI000B472E1D	:	:

Description

No Description!

Coordinates

chrchr1H:+:332738281..332738498

Molecular Weight (calculated)

7853.6 Da

IEP (calculated)

6.965

GRAVY (calculated)

0.774

Length

72 amino acids

Sequence
(BLAST)

1: YVPPWGQMNF WGATVITSLA SAIPVVGDTI VTWLWGGFSV DNATLNRFFS LHHLLPLILV GASLLHLAAL HQ

Best Arabidopsis Sequence Match ( AT2G07727.1 )
(BLAST)

001: MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFLIVVY
101: LHIFRGLYHA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPFILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIHAILRS IPDKAGGVAA
301: IAPVFICLLA LPFFKSMYVR SSSFRPIHQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SPLVFFLFFA ITPILGRVGR GIPNSYTDET DHT

Arabidopsis Description

Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal [Source:TAIR;Acc:AT2G07727]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.