Factsheet for HORVU1Hr1G009360.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
golgi 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075540.3
HORVU2Hr1G071350.1
HORVU2Hr1G076650.1
HORVU3Hr1G019540.2
HORVU3Hr1G098650.1
HORVU5Hr1G109620.2
HORVU6Hr1G051210.7
HORVU7Hr1G058850.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
ATMG00220.1	HORVU1Hr1G075540.3	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G019540.2	AT1G51980.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT3G27240.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT3G27240.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT3G46430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT4G32470.1	18189341
ATMG00220.1	HORVU2Hr1G071350.1	AT5G13430.1	18189341
ATMG00220.1	HORVU6Hr1G051210.7	AT5G13430.1	18189341
ATMG00220.1	HORVU5Hr1G109620.2	AT5G25450.1	18189341
ATMG00220.1	HORVU3Hr1G098650.1	AT5G40810.1	18189341
ATMG00220.1	HORVU7Hr1G058850.1	AT5G40810.1	18189341
ATMG00220.1	HORVU2Hr1G076650.1	AT5G59613.1	18189341

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G045710.1	Barley	extracellular	23.57	97.22
TraesCS3A01G188100.1	Wheat	peroxisome, plasma membrane, vacuole	57.24	97.14
HORVU7Hr1G044370.1	Barley	plasma membrane	96.3	96.3
HORVU5Hr1G072320.1	Barley	golgi, mitochondrion, plasma membrane	81.82	96.05
HORVU0Hr1G034150.1	Barley	golgi, mitochondrion, plasma membrane	84.85	88.73
TraesCS1B01G413000.1	Wheat	mitochondrion	86.2	81.53
HORVU3Hr1G045040.1	Barley	cytosol	50.84	71.23
GRMZM5G884707_P01	Maize	mitochondrion, plasma membrane	87.21	66.75
BAV58143	Barley	mitochondrion, plasma membrane	88.22	65.83
BAC19890	Rice	mitochondrion	87.88	65.74
TraesCS4D01G140500.1	Wheat	mitochondrion, plasma membrane	86.53	64.57
GSMUA_AchrUn_...	Banana	plasma membrane	56.57	63.64
ATMG00220.1	Thale cress	mitochondrion, plasma membrane	84.18	63.61
AT2G07727.1	Thale cress	mitochondrion, plasma membrane	84.18	63.61
TraesCS2D01G564500.1	Wheat	mitochondrion	82.49	63.47
Solyc09g050020.1.1	Tomato	nucleus	77.78	63.46
HORVU3Hr1G040840.1	Barley	plasma membrane	68.69	59.82
KRH57909	Soybean	mitochondrion	67.34	54.64
VIT_03s0110g00200.t01	Wine grape	cytosol	20.88	42.47
HORVU5Hr1G065020.1	Barley	golgi, mitochondrion, plasma membrane	17.17	21.98
HORVU6Hr1G049420.1	Barley	mitochondrion	17.17	21.98
AGP50784	Barley	plastid	17.17	21.98
HORVU2Hr1G062090.1	Barley	plasma membrane	16.16	20.69
HORVU0Hr1G037920.1	Barley	plasma membrane	12.12	19.89
HORVU7Hr1G052180.1	Barley	plastid	10.44	18.02
HORVU1Hr1G063040.1	Barley	plastid	10.44	18.02
HORVU1Hr1G003510.1	Barley	extracellular, mitochondrion, peroxisome	6.4	15.2
HORVU6Hr1G049430.1	Barley	endoplasmic reticulum, vacuole	4.04	8.63
HORVU0Hr1G034350.1	Barley	endoplasmic reticulum, vacuole	4.04	8.63

Protein Annotations

Gene3D:1.20.810.10	MapMan:2.4.3.1	UniProt:A0A287ELD8	InterPro:Cyt_b/b6_N	InterPro:Cytb/b6-like_sf	InterPro:Di-haem_cyt_TM
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0022904
EnsemblPlantsGene:HORVU1Hr1G009360	EnsemblPlants:HORVU1Hr1G009360.1	InterPro:IPR005797	InterPro:IPR027387	PFAM:PF00033	PFscan:PS51002
PANTHER:PTHR19271	PANTHER:PTHR19271:SF5	SUPFAM:SSF81342	TMHMM:TMhelix	UniParc:UPI000B47E22C	:

Description

No Description!

Coordinates

chrchr1H:-:20755424..20756616

Molecular Weight (calculated)

33709.8 Da

IEP (calculated)

9.243

GRAVY (calculated)

0.620

Length

297 amino acids

Sequence
(BLAST)

001: MTIRNQRFSL LKQPIYSTLN QHLIDYPTPS NLSYWWGFGS LAGICLVIQI VTGVFLAMHH TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFLIVVH
101: LHIFRGLYHA SYSSPREFVR CLGVVIFLLM IVTAFIGYVP PWGQLSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPLILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIASYPY FYVKDLVARV ASAIFFSIWI FLLLMFWGIP TIIYLLIRCP PRLILCRNGI SYRSMPFFAV YLTKREV

Best Arabidopsis Sequence Match ( AT2G07727.1 )
(BLAST)

001: MTIRNQRFSL LKQPISSTLN QHLVDYPTPS NLSYWWGFGP LAGICLVIQI VTGVFLAMHY TPHVDLAFNS VEHIMRDVEG GWLLRYMHAN GASMFLIVVY
101: LHIFRGLYHA SYSSPREFVW CLGVVIFLLM IVTAFIGYVL PWGQMSFWGA TVITSLASAI PVVGDTIVTW LWGGFSVDNA TLNRFFSLHH LLPFILVGAS
201: LLHLAALHQY GSNNPLGVHS EMDKIAFYPY FYVKDLVGWV AFAIFFSIWI FYAPNVLGHP DNYIPANPMS TPPHIVPEWY FLPIHAILRS IPDKAGGVAA
301: IAPVFICLLA LPFFKSMYVR SSSFRPIHQG MFWLLLADCL LLGWIGCQPV EAPFVTIGQI SPLVFFLFFA ITPILGRVGR GIPNSYTDET DHT

Arabidopsis Description

Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal [Source:TAIR;Acc:AT2G07727]
SUBAcon: [mitochondrion,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.