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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 3
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG98203 Soybean nucleus 82.56 82.08
KRH30163 Soybean nucleus 80.81 80.35
CDY70943 Canola nucleus 72.67 73.1
Bra006766.1-P Field mustard nucleus 71.51 71.93
CDY57389 Canola mitochondrion 71.51 71.93
AT5G37055.1 Thale cress mitochondrion 71.51 71.93
Bra002649.1-P Field mustard mitochondrion 70.93 71.34
CDY32983 Canola mitochondrion 70.93 71.34
Solyc03g033480.2.1 Tomato nucleus 68.6 69.01
PGSC0003DMT400058037 Potato nucleus 68.6 69.01
Bra031327.1-P Field mustard mitochondrion 25.58 67.69
CDX99412 Canola mitochondrion 25.58 67.69
EES16500 Sorghum cytosol, nucleus, plastid 67.44 67.05
EES16499 Sorghum mitochondrion 66.28 66.28
CDY40293 Canola mitochondrion 25.0 66.15
CDX99372 Canola mitochondrion 25.0 66.15
Os03t0367800-01 Rice cytosol, mitochondrion, nucleus 66.28 65.14
GSMUA_AchrUn_... Banana cytosol, mitochondrion, nucleus 75.58 65.0
CDX77159 Canola mitochondrion 24.42 64.62
TraesCS5A01G151300.1 Wheat cytosol, nucleus, plastid 64.53 64.16
TraesCS5B01G149800.2 Wheat cytosol, nucleus, plastid 64.53 64.16
Zm00001d052325_P001 Maize cytosol, nucleus, plastid 63.95 63.58
CDY60020 Canola cytosol 46.51 61.07
HORVU5Hr1G047490.2 Barley plastid 65.12 60.22
TraesCS5D01G156400.2 Wheat cytosol, mitochondrion, nucleus 62.21 56.61
Bra032836.1-P Field mustard mitochondrion 42.44 56.15
KXG22781 Sorghum plastid 29.07 52.63
Protein Annotations
EntrezGene:100245318wikigene:100245318MapMan:12.4.4.3ProteinID:CBI29882ProteinID:CBI29882.3ncoils:Coil
UniProt:D7TI06EMBL:FN595991GO:GO:0000003GO:GO:0000812GO:GO:0003674GO:GO:0003682
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0006464GO:GO:0006950GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0009605
GO:GO:0009607GO:GO:0009791GO:GO:0009908GO:GO:0009909GO:GO:0009987GO:GO:0016043
GO:GO:0019538GO:GO:0031063GO:GO:0031491GO:GO:0040007GO:GO:0042742GO:GO:0042802
GO:GO:0042826GO:GO:0043486GO:GO:0046872GO:GO:0048638InterPro:IPR007529EntrezGene:LOC100245318
wikigene:LOC100245318PFAM:PF04438PFscan:PS51083PANTHER:PTHR13093SUPFAM:SSF144232UniParc:UPI00015CAAD3
ArrayExpress:VIT_08s0007g08060EnsemblPlantsGene:VIT_08s0007g08060EnsemblPlants:VIT_08s0007g08060.t01unigene:Vvi.3094RefSeq:XP_002283156RefSeq:XP_002283156.1
InterPro:Znf_HITSEG:seg::::
Description
No Description!
Coordinates
chr8:+:21405007..21406789
Molecular Weight (calculated)
19043.2 Da
IEP (calculated)
8.290
GRAVY (calculated)
-0.723
Length
172 amino acids
Sequence
(BLAST)
001: MDDDSGSLRR MSTRTRKVAS RMAAALASTD NRNQAALARL EALENDNAGM ETIDVNDDED ASLDDDDEGY AQKRQSKGTK RTTRQAKALE NARKAPRTFL
101: ELVHEANLES LPPHVPSYLR AAVGPPSSTS RRHFCTVCGF AANYTCVRCG TRFCSTRCQN IHNDTRCLKF VA
Best Arabidopsis Sequence Match ( AT5G37055.1 )
(BLAST)
001: MEEEMSNRRV SNRTRKVATK MAAALTSNDN RTQAAIARLE ALENDNGAIE VIDLNDDEEA SLDEDDDLGY LQKKQHKGSK RKTRQAKALE ARKAPKSFLE
101: LLQEANLESL PSHVPTYLKA AVGPPSSSSR RYFCSVCGYI AGYNCCLCGM RFCSIRCQNI HKDTRCQKFV A
Arabidopsis Description
SWC6SWR1 complex subunit 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHW2]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.