Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- cytosol 1
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031435.1-P | Field mustard | cytosol, mitochondrion | 68.65 | 70.56 |
| CDY47573 | Canola | cytosol, mitochondrion | 68.65 | 70.56 |
| CDY15010 | Canola | mitochondrion, nucleus | 67.57 | 69.06 |
| Bra038577.1-P | Field mustard | mitochondrion | 53.51 | 62.66 |
| CDY03828 | Canola | mitochondrion | 70.27 | 57.27 |
| CDY72037 | Canola | mitochondrion | 64.86 | 56.07 |
| KRH10756 | Soybean | cytosol | 27.03 | 43.86 |
| PGSC0003DMT400057575 | Potato | mitochondrion | 21.08 | 41.94 |
| KRH21550 | Soybean | cytosol | 19.46 | 41.86 |
| PGSC0003DMT400012930 | Potato | cytosol | 35.68 | 41.51 |
| Solyc03g006640.2.1 | Tomato | cytosol | 35.14 | 40.88 |
| AT4G05010.1 | Thale cress | nucleus | 36.22 | 40.85 |
| KRH21571 | Soybean | cytosol | 32.97 | 40.13 |
| Solyc10g005480.2.1 | Tomato | cytosol, plastid | 37.3 | 38.98 |
| PGSC0003DMT400029256 | Potato | plastid | 36.76 | 38.42 |
| Solyc02g079150.1.1 | Tomato | mitochondrion | 34.05 | 38.18 |
| KRH41926 | Soybean | plastid | 30.81 | 36.77 |
| GSMUA_Achr6P29300_001 | Banana | cytosol | 25.41 | 36.72 |
| CDY40953 | Canola | extracellular, golgi | 36.76 | 36.56 |
| GSMUA_Achr9P02840_001 | Banana | cytosol | 32.43 | 36.36 |
| KRH49947 | Soybean | mitochondrion, plastid | 30.27 | 36.13 |
| Zm00001d021779_P001 | Maize | cytosol | 20.0 | 33.64 |
| TraesCS2A01G205100.1 | Wheat | plastid | 29.19 | 32.93 |
| HORVU2Hr1G040830.2 | Barley | plastid | 28.65 | 32.32 |
| TraesCS2B01G232500.1 | Wheat | plastid | 28.65 | 32.32 |
| AT4G21510.1 | Thale cress | cytosol | 38.92 | 32.0 |
| TraesCS2D01G211000.1 | Wheat | plastid | 28.11 | 31.71 |
| KXG36477 | Sorghum | plastid | 28.65 | 31.18 |
| Zm00001d006591_P001 | Maize | plastid | 27.57 | 30.0 |
| Os07t0561300-01 | Rice | plastid | 24.32 | 26.79 |
| KRH49741 | Soybean | mitochondrion | 22.16 | 25.31 |
Protein Annotations
| MapMan:35.1 | EntrezGene:842428 | ProteinID:AAC13907.1 | ProteinID:AEE33822.1 | ProteinID:AEE33823.2 | EMBL:AK118391 |
| ArrayExpress:AT1G61340 | EnsemblPlantsGene:AT1G61340 | RefSeq:AT1G61340 | TAIR:AT1G61340 | RefSeq:AT1G61340-TAIR-G | EnsemblPlants:AT1G61340.1 |
| TAIR:AT1G61340.1 | EMBL:BT003706 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006950 | GO:GO:0006970 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009611 |
| GO:GO:0009617 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009751 |
| GO:GO:0009753 | GO:GO:0009961 | InterPro:IPR001810 | RefSeq:NP_001319283.1 | RefSeq:NP_176329.1 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50181 | PANTHER:PTHR34049 | PANTHER:PTHR34049:SF1 | UniProt:Q8GX77 |
| UniParc:UPI00000ADF25 | : | : | : | : | : |
Description
F-box protein At1g61340 [Source:UniProtKB/Swiss-Prot;Acc:Q8GX77]
Coordinates
chr1:+:22628264..22630020
Molecular Weight (calculated)
21027.1 Da
IEP (calculated)
8.708
GRAVY (calculated)
-0.631
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MALGKKRIVT QKPNLRQRRD VDNGGLGLGL EFVQYKRGFG RKRILISSGD EMEDSIFTSP VGKKLCDDKT TSVAEGQSRE LEDLPLDILV RIICGVEHED
101: LKQLFHVSKT IREATMIAKQ SHFAYSTPRK TSVFHHGRFG WDKPFDVEDD DEEIEAPGAP LQKRYRLSRI NRNKDDSGVS VALFH
101: LKQLFHVSKT IREATMIAKQ SHFAYSTPRK TSVFHHGRFG WDKPFDVEDD DEEIEAPGAP LQKRYRLSRI NRNKDDSGVS VALFH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.