Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- endoplasmic reticulum 1
- mitochondrion 5
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000097.1-P | Field mustard | mitochondrion | 91.91 | 93.28 |
| CDY07697 | Canola | mitochondrion | 91.91 | 93.28 |
| CDY14429 | Canola | plastid | 91.91 | 93.28 |
| GSMUA_Achr1P04720_001 | Banana | nucleus | 88.97 | 90.3 |
| PGSC0003DMT400051893 | Potato | extracellular | 89.71 | 89.05 |
| AT3G54560.1 | Thale cress | cytosol | 88.97 | 88.97 |
| GSMUA_Achr1P27260_001 | Banana | nucleus | 87.5 | 88.81 |
| GSMUA_Achr8P26920_001 | Banana | nucleus | 87.5 | 88.81 |
| KRH71352 | Soybean | mitochondrion | 88.24 | 88.24 |
| KRH32088 | Soybean | nucleus | 88.24 | 88.24 |
| GSMUA_Achr8P04480_001 | Banana | nucleus | 86.76 | 88.06 |
| VIT_00s0179g00340.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 86.03 | 87.97 |
| Os10t0418000-01 | Rice | nucleus | 89.71 | 87.77 |
| GSMUA_Achr3P15210_001 | Banana | nucleus | 86.03 | 87.31 |
| TraesCS1B01G154500.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| TraesCS7D01G246600.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| TraesCS1A01G132400.1 | Wheat | mitochondrion | 88.97 | 87.05 |
| Zm00001d013300_P001 | Maize | mitochondrion, nucleus | 87.5 | 86.86 |
| Zm00001d033979_P001 | Maize | mitochondrion, nucleus | 87.5 | 86.86 |
| PGSC0003DMT400049686 | Potato | nucleus | 88.24 | 86.33 |
| Os03t0162200-01 | Rice | nucleus | 87.5 | 86.23 |
| Os03t0743400-01 | Rice | nucleus | 86.76 | 86.13 |
| EES07107 | Sorghum | mitochondrion | 86.76 | 85.51 |
| Zm00001d027760_P001 | Maize | plastid | 86.76 | 85.51 |
| KRH67280 | Soybean | cytosol, mitochondrion, nucleus, plastid | 85.29 | 85.29 |
| KRG95601 | Soybean | cytosol, mitochondrion, nucleus, plastid | 85.29 | 85.29 |
| KXG28801 | Sorghum | nucleus | 80.15 | 81.95 |
| AT1G52740.1 | Thale cress | nucleus | 79.41 | 80.6 |
| KXG40126 | Sorghum | nucleus | 75.74 | 77.44 |
| Zm00001d007567_P001 | Maize | nucleus | 67.65 | 69.7 |
| Solyc06g084090.2.1 | Tomato | nucleus | 89.71 | 60.1 |
| AT4G13570.2 | Thale cress | cytoskeleton, cytosol, nucleus | 54.41 | 59.68 |
| TraesCS2D01G571800.1 | Wheat | mitochondrion, nucleus, plastid | 51.47 | 58.33 |
| GSMUA_Achr6P23340_001 | Banana | mitochondrion | 87.5 | 51.74 |
| Zm00001d007553_P001 | Maize | nucleus | 66.91 | 47.89 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.2 | EntrezGene:818463 | UniProt:A0A178W033 | ProteinID:AAD25562.1 | ProteinID:AEC09586.1 |
| ProteinID:AEC09587.1 | ProteinID:AEC09588.1 | EMBL:AK220868 | EMBL:AK228272 | ProteinID:ANM62202.1 | ArrayExpress:AT2G38810 |
| EnsemblPlantsGene:AT2G38810 | RefSeq:AT2G38810 | TAIR:AT2G38810 | RefSeq:AT2G38810-TAIR-G | EnsemblPlants:AT2G38810.3 | TAIR:AT2G38810.3 |
| EMBL:AY088573 | EMBL:BT026423 | GO:GO:0000786 | GO:GO:0000790 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005694 | GO:GO:0005730 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006342 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010468 | GO:GO:0016043 |
| GO:GO:0040029 | GO:GO:0044030 | GO:GO:0046982 | Symbol:HTA8 | InterPro:Histone-fold | InterPro:Histone_H2A |
| InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2A_C | InterPro:IPR009072 | RefSeq:NP_001318377.1 | RefSeq:NP_181415.1 | RefSeq:NP_850298.1 |
| RefSeq:NP_850299.1 | ProteinID:OAP10683.1 | PFAM:PF00125 | PFAM:PF16211 | PO:PO:0000013 | PO:PO:0000016 |
| PO:PO:0000037 | PO:PO:0000229 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006020 | PO:PO:0006085 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PRINTS:PR00620 | PANTHER:PTHR23430 | PANTHER:PTHR23430:SF211 | UniProt:Q0WRN0 |
| UniProt:Q9SII0 | SMART:SM00414 | SUPFAM:SSF47113 | UniParc:UPI000009CC0B | SEG:seg | : |
Description
HTA8Probable histone H2A variant 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SII0]
Coordinates
chr2:-:16219220..16220923
Molecular Weight (calculated)
14370.6 Da
IEP (calculated)
11.199
GRAVY (calculated)
-0.202
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGKGGKGLL AAKTTAAAAN KDSVKKKSIS RSSRAGIQFP VGRIHRQLKQ RVSAHGRVGA TAAVYTASIL EYLTAEVLEL AGNASKDLKV KRITPRHLQL
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLV NKVTKD
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLV NKVTKD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.