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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • plastid 1
  • endoplasmic reticulum 1
  • mitochondrion 3
  • cytosol 1
PPI

Inferred distinct locusB in Crop

locusBlocations
KRH38118
KRH58568
KRH71872

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH67280 Soybean cytosol, mitochondrion, nucleus, plastid 100.0 100.0
KRH71352 Soybean mitochondrion 96.32 96.32
KRH32088 Soybean nucleus 96.32 96.32
VIT_00s0179g00340.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 88.24 90.23
AT3G54560.1 Thale cress cytosol 89.71 89.71
TraesCS7D01G246600.1 Wheat mitochondrion 91.18 89.21
TraesCS1B01G154500.1 Wheat mitochondrion 91.18 89.21
TraesCS1A01G132400.1 Wheat mitochondrion 91.18 89.21
Os10t0418000-01 Rice nucleus 91.18 89.21
CDX67603 Canola nucleus 90.44 89.13
CDY07535 Canola nucleus 90.44 89.13
Bra003188.1-P Field mustard nucleus 90.44 89.13
Os03t0743400-01 Rice nucleus 89.71 89.05
GSMUA_Achr1P04720_001 Banana nucleus 87.5 88.81
GSMUA_Achr8P04480_001 Banana nucleus 87.5 88.81
GSMUA_Achr3P15210_001 Banana nucleus 87.5 88.81
Zm00001d033979_P001 Maize mitochondrion, nucleus 88.97 88.32
Zm00001d013300_P001 Maize mitochondrion, nucleus 88.97 88.32
CDX78246 Canola cytosol 88.24 88.24
Bra007080.1-P Field mustard cytosol 88.24 88.24
GSMUA_Achr8P26920_001 Banana nucleus 86.76 88.06
Zm00001d027760_P001 Maize plastid 88.97 87.68
EES07107 Sorghum mitochondrion 88.97 87.68
Bra014808.1-P Field mustard mitochondrion 87.5 87.5
GSMUA_Achr1P27260_001 Banana nucleus 86.03 87.31
PGSC0003DMT400049686 Potato nucleus 88.97 87.05
Os03t0162200-01 Rice nucleus 88.24 86.96
CDY57201 Canola nucleus 77.94 86.89
PGSC0003DMT400051893 Potato extracellular 87.5 86.86
CDY07697 Canola mitochondrion 85.29 86.57
Bra000097.1-P Field mustard mitochondrion 85.29 86.57
KRH52500 Soybean nucleus 86.03 86.03
CDY14429 Canola plastid 84.56 85.82
AT2G38810.3 Thale cress mitochondrion 85.29 85.29
KRH54863 Soybean nucleus 84.56 85.19
KRH16015 Soybean nucleus 80.15 85.16
KRH63015 Soybean nucleus 83.82 85.07
KRH05097 Soybean nucleus 82.35 83.58
KXG28801 Sorghum nucleus 80.88 82.71
KXG40126 Sorghum nucleus 77.21 78.95
Zm00001d007567_P001 Maize nucleus 73.53 75.76
CDY13216 Canola mitochondrion 87.5 63.64
Solyc06g084090.2.1 Tomato nucleus 87.5 58.62
CDX73471 Canola plastid 88.24 57.69
TraesCS2D01G571800.1 Wheat mitochondrion, nucleus, plastid 47.79 54.17
KRH27119 Soybean nucleus 52.21 52.59
Zm00001d007553_P001 Maize nucleus 72.06 51.58
GSMUA_Achr6P23340_001 Banana mitochondrion 86.03 50.87
Protein Annotations
Gene3D:1.10.20.10EntrezGene:100796183EntrezGene:100807862MapMan:12.1.2UniProt:A0A0R0KK01EMBL:ACUP02002049
EMBL:ACUP02012120EnsemblPlantsGene:GLYMA_19G160400GO:GO:0000786GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634
GO:GO:0005694GO:GO:0046982InterPro:Histone-foldInterPro:Histone_H2AInterPro:Histone_H2A/H2B/H3InterPro:Histone_H2A_C
InterPro:IPR009072EnsemblPlants:KRG95601ProteinID:KRG95601ProteinID:KRG95601.1ProteinID:KRH67280.1PFAM:PF00125
PFAM:PF16211PRINTS:PR00620PANTHER:PTHR23430PANTHER:PTHR23430:SF211SMART:SM00414SUPFAM:SSF47113
UniParc:UPI000189DA6FSEG:seg::::
Description
hypothetical protein
Coordinates
chr19:-:42123167..42124826
Molecular Weight (calculated)
14524.8 Da
IEP (calculated)
11.115
GRAVY (calculated)
-0.374
Length
136 amino acids
Sequence
(BLAST)
001: MAGKGGKGLV AGKTTAANKD KDKDKKRPVS RSSRAGIQFP VGRIHRQLKQ RVQANGRVGA TAAVYLASIL EYLTAEVLEL AGNASKDLKV KRITPRHLQL
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLI NKAAKE
Best Arabidopsis Sequence Match ( AT3G54560.1 )
(BLAST)
001: MAGKGGKGLV AAKTMAANKD KDKDKKKPIS RSARAGIQFP VGRIHRQLKT RVSAHGRVGA TAAVYTASIL EYLTAEVLEL AGNASKDLKV KRITPRHLQL
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLI NKTTKE
Arabidopsis Description
H2AVHistone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178V944]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.