Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78246 | Canola | cytosol | 65.38 | 100.0 |
| Bra007080.1-P | Field mustard | cytosol | 65.38 | 100.0 |
| CDY57201 | Canola | nucleus | 55.29 | 94.26 |
| CDX67603 | Canola | nucleus | 61.54 | 92.75 |
| CDY07535 | Canola | nucleus | 61.54 | 92.75 |
| CDY07697 | Canola | mitochondrion | 58.17 | 90.3 |
| CDY14429 | Canola | plastid | 57.69 | 89.55 |
| VIT_00s0179g00340.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 57.21 | 89.47 |
| KRG95601 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.69 | 88.24 |
| KRH67280 | Soybean | cytosol, mitochondrion, nucleus, plastid | 57.69 | 88.24 |
| GSMUA_Achr1P04720_001 | Banana | nucleus | 56.73 | 88.06 |
| GSMUA_Achr8P26920_001 | Banana | nucleus | 56.73 | 88.06 |
| KRH71352 | Soybean | mitochondrion | 57.21 | 87.5 |
| KRH32088 | Soybean | nucleus | 57.21 | 87.5 |
| GSMUA_Achr8P04480_001 | Banana | nucleus | 56.25 | 87.31 |
| GSMUA_Achr3P15210_001 | Banana | nucleus | 56.25 | 87.31 |
| Os10t0418000-01 | Rice | nucleus | 58.17 | 87.05 |
| PGSC0003DMT400051893 | Potato | extracellular | 57.21 | 86.86 |
| GSMUA_Achr1P27260_001 | Banana | nucleus | 55.77 | 86.57 |
| TraesCS1A01G132400.1 | Wheat | mitochondrion | 57.69 | 86.33 |
| TraesCS1B01G154500.1 | Wheat | mitochondrion | 57.69 | 86.33 |
| TraesCS7D01G246600.1 | Wheat | mitochondrion | 57.69 | 86.33 |
| KXG28801 | Sorghum | nucleus | 54.81 | 85.71 |
| CDY62164 | Canola | nucleus | 51.44 | 85.6 |
| Os03t0162200-01 | Rice | nucleus | 56.73 | 85.51 |
| EES07107 | Sorghum | mitochondrion | 56.73 | 85.51 |
| Zm00001d027760_P001 | Maize | plastid | 56.73 | 85.51 |
| CDY62197 | Canola | nucleus | 55.29 | 85.19 |
| CDY61820 | Canola | nucleus | 55.29 | 85.19 |
| CDY47568 | Canola | nucleus | 55.29 | 85.19 |
| CDY40131 | Canola | nucleus | 55.29 | 85.19 |
| CDY21851 | Canola | nucleus | 54.81 | 85.07 |
| Zm00001d013300_P001 | Maize | mitochondrion, nucleus | 55.29 | 83.94 |
| Zm00001d033979_P001 | Maize | mitochondrion, nucleus | 55.29 | 83.94 |
| PGSC0003DMT400049686 | Potato | nucleus | 55.77 | 83.45 |
| Os03t0743400-01 | Rice | nucleus | 54.81 | 83.21 |
| KXG40126 | Sorghum | nucleus | 50.48 | 78.95 |
| Zm00001d007567_P001 | Maize | nucleus | 46.63 | 73.48 |
| CDY13216 | Canola | mitochondrion | 62.98 | 70.05 |
| CDX99552 | Canola | plastid | 41.35 | 68.25 |
| Solyc06g084090.2.1 | Tomato | nucleus | 59.13 | 60.59 |
| TraesCS2D01G571800.1 | Wheat | mitochondrion, nucleus, plastid | 31.73 | 55.0 |
| GSMUA_Achr6P23340_001 | Banana | mitochondrion | 59.13 | 53.48 |
| Zm00001d007553_P001 | Maize | nucleus | 48.56 | 53.16 |
| CDY21852 | Canola | nucleus | 49.52 | 50.0 |
| CDY22659 | Canola | nucleus, plastid | 31.25 | 45.14 |
| CDY23443 | Canola | mitochondrion | 24.52 | 42.5 |
| CDY11491 | Canola | mitochondrion | 16.35 | 39.53 |
| CDY51246 | Canola | plastid | 22.6 | 21.36 |
Protein Annotations
| Gene3D:1.10.20.10 | MapMan:12.1.2 | GO:A0A078C8S2 | EnsemblPlants:CDX73471 | ProteinID:CDX73471 | ProteinID:CDX73471.1 |
| GO:GO:0000786 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0046982 | EnsemblPlantsGene:GSBRNA2T00108982001 |
| InterPro:Histone-fold | InterPro:Histone_H2A | InterPro:Histone_H2A/H2B/H3 | InterPro:Histone_H2A_C | InterPro:IPR009072 | PFAM:PF00125 |
| PFAM:PF16211 | PRINTS:PR00620 | PANTHER:PTHR23430 | PANTHER:PTHR23430:SF211 | SMART:SM00414 | SUPFAM:SSF47113 |
| UniParc:UPI0004EE6018 | SEG:seg | : | : | : | : |
Description
BnaC08g25320D
Coordinates
chrLK031799:-:606405..608417
Molecular Weight (calculated)
22861.9 Da
IEP (calculated)
10.657
GRAVY (calculated)
-0.182
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPYTFSPCY IAECSIMFFG GSKEKMSFVF NFMSVFSLSI INNKSSLNFV YYSLSISSSL RSRSEQYQLR ANMAGKGGKG LIATKTMAGN KDKDKDKKKP
101: ITRSARAGIQ FPVGRIHRQL KTRVSAHGRV GATAAVYTAS ILEYLTAEVL ELAGNASKDL KVKRITPRHL QLAIRGDEEL DTLIKGTIAG GGVIPHIHKS
201: LINKAIKE
101: ITRSARAGIQ FPVGRIHRQL KTRVSAHGRV GATAAVYTAS ILEYLTAEVL ELAGNASKDL KVKRITPRHL QLAIRGDEEL DTLIKGTIAG GGVIPHIHKS
201: LINKAIKE
001: MAGKGGKGLV AAKTMAANKD KDKDKKKPIS RSARAGIQFP VGRIHRQLKT RVSAHGRVGA TAAVYTASIL EYLTAEVLEL AGNASKDLKV KRITPRHLQL
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLI NKTTKE
101: AIRGDEELDT LIKGTIAGGG VIPHIHKSLI NKTTKE
Arabidopsis Description
H2AVHistone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178V944]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.