Factsheet for Bra000960.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 4
plasma membrane 5
endoplasmic reticulum 4
vacuole 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037355.1-P	Field mustard	nucleus	96.58	14.3
Bra000807.1-P	Field mustard	nucleus	61.54	12.06
Bra003439.1-P	Field mustard	nucleus	78.63	11.72
Bra004934.1-P	Field mustard	nucleus	77.78	11.58
Bra028295.1-P	Field mustard	nucleus	60.68	10.41
Bra015401.1-P	Field mustard	nucleus	62.39	10.14
Bra038757.1-P	Field mustard	nucleus	62.39	10.07
Bra032478.1-P	Field mustard	nucleus	61.54	10.01
Bra013556.1-P	Field mustard	nucleus	58.97	10.0
Bra020872.1-P	Field mustard	nucleus	63.25	9.89
Bra029527.1-P	Field mustard	nucleus	62.39	9.8
Bra003846.1-P	Field mustard	nucleus	57.27	9.5
Bra015996.1-P	Field mustard	nucleus	57.27	9.34
Bra016578.1-P	Field mustard	nucleus	52.99	9.06
Bra025938.1-P	Field mustard	nucleus	52.99	8.93
Bra013898.1-P	Field mustard	nucleus	37.61	7.06
Bra005588.1-P	Field mustard	nucleus	41.88	6.96
Bra023611.1-P	Field mustard	nucleus	41.88	6.95
Bra003535.1-P	Field mustard	nucleus	41.88	6.53
Bra021779.1-P	Field mustard	nucleus	39.32	6.32
Bra021035.1-P	Field mustard	nucleus	39.32	6.27
Bra003213.1-P	Field mustard	nucleus	37.61	6.2
Bra021363.1-P	Field mustard	nucleus	36.75	5.91
Bra008562.1-P	Field mustard	cytosol, nucleus, plastid	35.9	5.81
Bra032003.1-P	Field mustard	nucleus	34.19	5.81
Bra024984.1-P	Field mustard	nucleus	39.32	5.79
Bra017519.1-P	Field mustard	nucleus	39.32	5.64
Bra020066.1-P	Field mustard	nucleus	32.48	5.57
Bra007562.1-P	Field mustard	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:Bra000960.1	EnsemblPlants:Bra000960.1-P	EnsemblPlantsGene:Bra000960	PANTHER:PTHR24326	PANTHER:PTHR24326:SF507	SUPFAM:SSF55961
UniParc:UPI0002540709	UniProt:M4C9T1	MapMan:15.5.3.3	:	:	:

Description

AT4G00730 (E=6e-057) ANL2, AHDP | ANL2 (ANTHOCYANINLESS 2); transcription factor/ transcription regulator

Coordinates

chrA03:+:14139192..14139545

Molecular Weight (calculated)

12125.6 Da

IEP (calculated)

3.809

GRAVY (calculated)

0.381

Length

117 amino acids

Sequence
(BLAST)

001: MNANQSSMLI LQETCIDASG ALVVYAPVDI PAMNVVMNGG DSSYVALLPS GFAVLPDGGS GDVEQRPVGG GSLLTVAFQI LVNNLPTAKL TVESVETVNN
101: LISCTVQKIR DALQCES

Best Arabidopsis Sequence Match ( AT3G61150.1 )
(BLAST)

001: MNFNGFLDDG AGASKLLSDA PYNNHFSFSA VDTMLGSAAI APSQSLPFSS SGLSLGLQTN GEMSRNGEIM ESNVSRKSSR GEDVESRSES DNAEAVSGDD
101: LDTSDRPLKK KKRYHRHTPK QIQDLESVFK ECAHPDEKQR LDLSRRLNLD PRQVKFWFQN RRTQMKTQIE RHENALLRQE NDKLRAENMS VREAMRNPMC
201: GNCGGPAVIG EISMEEQHLR IENSRLKDEL DRVCALTGKF LGRSNGSHHI PDSALVLGVG VGSGGCNVGG GFTLSSPLLP QASPRFEISN GTGSGLVATV
301: NRQQPVSVSD FDQRSRYLDL ALAAMDELVK MAQTREPLWV RSSDSGFEVL NQEEYDTSFS RCVGPKQDGF VSEASKEAGT VIINSLALVE TLMDSERWAE
401: MFPSMVSRTS TTEIISSGMG GRNGALHLMH AELQLLSPLV PVRQVSFLRF CKQHAEGVWA VVDVSIDSIR EGSSSSCRRL PSGCLVQDMA NGYSKVTWIE
501: HTEYDENHIH RLYRPLLRCG LAFGAHRWMA ALQRQCECLT ILMSSTVSTS TNPSPINCNG RKSMLKLAKR MTDNFCGGVC ASSLQKWSKL NVGNVDEDVR
601: IMTRKSVNNP GEPPGIILNA ATSVWMPVSP RRLFDFLGNE RLRSEWDILS NGGPMKEMAH IAKGHDRSNS VSLLRASAIN ANQSSMLILQ ETSIDAAGAV
701: VVYAPVDIPA MQAVMNGGDS AYVALLPSGF AILPNGQAGT QRCAAEERNS IGNGGCMEEG GSLLTVAFQI LVNSLPTAKL TVESVETVNN LISCTVQKIK
801: AALHCDST

Arabidopsis Description

HDG1HDG1 [Source:UniProtKB/TrEMBL;Acc:A0A178V5Q4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.