Factsheet for Bra011369.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75269	Canola	cytosol, peroxisome, plasma membrane	89.13	80.55
Bra029597.1-P	Field mustard	cytosol	39.86	37.29
Bra001210.1-P	Field mustard	cytosol	38.51	36.72
Bra011370.1-P	Field mustard	cytosol	23.9	36.44
Bra017626.1-P	Field mustard	cytosol	24.69	25.8
Bra034602.1-P	Field mustard	plasma membrane	23.33	24.76
Bra029598.1-P	Field mustard	cytosol	6.34	22.76
Bra011487.1-P	Field mustard	cytosol, plastid	28.54	22.56
GSMUA_Achr1P26100_001	Banana	plasma membrane	24.58	22.1
TraesCS1B01G465300.1	Wheat	cytosol	19.03	21.35
TraesCS1A01G328300.1	Wheat	cytosol	16.87	20.99
TraesCS1B01G342100.2	Wheat	cytosol	16.53	20.74
TraesCS1D01G330800.1	Wheat	cytosol	16.53	20.68
HORVU5Hr1G098410.4	Barley	plasma membrane	18.46	20.58
TraesCS5D01G415200.1	Wheat	plasma membrane	15.63	20.2
TraesCS1A01G430800.1	Wheat	cytosol	15.06	20.12
TraesCS7D01G348000.2	Wheat	cytosol	20.5	20.07
TraesCS1B01G465500.1	Wheat	cytosol	15.06	20.06
TraesCS1D01G439900.1	Wheat	cytosol	17.1	19.97
TraesCS7A01G340400.1	Wheat	cytosol	20.16	19.71
TraesCS7B01G252000.1	Wheat	cytosol	20.05	19.58
HORVU7Hr1G083770.3	Barley	cytosol	20.16	19.06
TraesCS1D01G440100.2	Wheat	cytosol, nucleus, plasma membrane	16.99	18.38
HORVU1Hr1G093800.1	Barley	cytosol	16.08	18.35
TraesCS1B01G465700.1	Wheat	cytosol	16.19	17.68
GSMUA_Achr1P26090_001	Banana	cytosol, plastid	2.15	16.81
TraesCS1B01G465200.1	Wheat	plasma membrane	7.93	16.28
TraesCS5A01G405100.1	Wheat	plasma membrane	6.68	16.25
Os08t0100400-01	Rice	cytosol	11.21	16.23
HORVU1Hr1G093830.1	Barley	plasma membrane	14.16	16.13
TraesCS1A01G430500.1	Wheat	plasma membrane	7.81	16.05
Solyc01g020190.2.1	Tomato	plastid	1.93	13.6

Protein Annotations

EnsemblPlants:Bra011369.1	EnsemblPlants:Bra011369.1-P	EnsemblPlantsGene:Bra011369	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR13145	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002546254	UniProt:M4D4G5	MapMan:19.2.1.1.1.1

Description

AT4G32670 (E=5e-147) | zinc ion binding

Coordinates

chrA01:+:2506920..2510383

Molecular Weight (calculated)

101258.0 Da

IEP (calculated)

7.420

GRAVY (calculated)

0.557

Length

883 amino acids

Sequence
(BLAST)

001: MDVFPAENED GGYDRALPAE ESDKDDDDDD GGDLCRICRS PEGPNDPLRR FVTTIHVCFT KSSSTQVCRR SYSFVPVYSE NAPERLPWHE FVRGLSLRAL
101: RVAAYVFVFL FNAFCFSLHP WGRSTAIENQ RVFRVSEKFA LLLAGFLYNG WIAYIMTMMA VLKLAAEDIS WLVHREIHGE NEQGRVGGGG GGGVACAFWK
201: SVGILCDWWH DCLTRRGFFH AVLVEPREAV IRLRNPQLRE FGAVRRFLFL LDDNAFAVLA ISFYVSFFFV LLPFMMGRLV ILLFQRMGVA TQLLSGDDSL
301: PQELVVIGYW TMLSLSLAYL GSFSTLSRAI AKNLSLGFLV VAVALLYLLW ILSAKVWKNL YVVKLKEGFV LSLKFGVLPL VLGCWLDFCT LPILGITVSR
401: RLEFVSDYPF VMIVHWVYGE LYLLLVSNSM ELIQKILQKR PFWFLLDVTD PNYKITKLYL GQLLFALAFH ASLMVILVHL PIMTISFISP SFFPLHLWFY
501: EERIMFLSMA AYLWLGRIRV IDWLVDLIQP AIEPIVHKWI IIVSSWLQLR DFFLGNHANQ NVRPLLQQGL EIADEWSQVL SIAEGSLVSF YGSQHDTTSE
601: DDTDDDRFIK LRIGLMLVLA TVSLFLISTI SMALPILVGR TFFHSISFIL DKFGLKHDDL YGFWIGCYIL RVTYIGACFI INHIMIRRTD LLLNLVLLWI
701: RNALLFSVWV SFIPMLLGLL IDLMIIIPTQ VPLSETPVYS FLRDWLIGLV VLHIWTYLTM FTRVNCFATV ACREKLKRIR SVGINRLPWK WLLGKVICPI
801: IKTLLITLVF PFVVANSLLP LLQFSGAVDL AVQRLIWPVL LAIIIIGFIA KLTLDLFHYI HRLEYNDRYM VGDRVADFIE DHS

Best Arabidopsis Sequence Match ( AT4G32670.1 )
(BLAST)

001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE

Arabidopsis Description

RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.