Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G348000.2 | Wheat | cytosol | 96.01 | 96.12 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 95.35 | 95.24 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 93.58 | 90.47 |
| Os08t0100400-01 | Rice | cytosol | 42.19 | 62.46 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 22.04 | 54.82 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 41.31 | 52.54 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 24.58 | 51.63 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 37.1 | 50.68 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.43 | 35.4 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.21 | 30.4 |
| TraesCS7A01G524600.2 | Wheat | cytosol | 35.11 | 28.84 |
| CDX68876 | Canola | cytosol | 7.97 | 26.87 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 28.68 | 26.37 |
| Bra011370.1-P | Field mustard | cytosol | 15.73 | 24.52 |
| CDX68874 | Canola | plasma membrane | 9.41 | 24.29 |
| Bra029598.1-P | Field mustard | cytosol | 6.53 | 23.98 |
| AT4G32670.1 | Thale cress | cytosol | 21.93 | 23.02 |
| CDY05287 | Canola | cytosol | 20.71 | 22.37 |
| CDX75270 | Canola | cytosol | 20.16 | 21.54 |
| CDX68875 | Canola | plasma membrane | 4.98 | 21.23 |
| Bra001210.1-P | Field mustard | cytosol | 21.71 | 21.17 |
| CDX68877 | Canola | cytosol | 18.6 | 21.08 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 19.71 | 20.16 |
| Bra029597.1-P | Field mustard | cytosol | 20.71 | 19.81 |
| CDY24673 | Canola | cytosol | 20.6 | 19.72 |
| CDX74093 | Canola | cytosol | 21.48 | 19.6 |
| CDY05286 | Canola | cytosol | 20.6 | 19.54 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 19.71 | 18.22 |
| CDY70269 | Canola | plastid | 13.4 | 17.19 |
| CDY08527 | Canola | plasma membrane | 6.2 | 16.77 |
| CDY24672 | Canola | extracellular | 2.21 | 14.81 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G340400.1 | EnsemblPlantsGene:TraesCS7A01G340400 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011016 | InterPro:IPR013083 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR13145 | PFAM:PF12906 |
| PFscan:PS51292 | SEG:seg | SMART:SM00744 | SUPFAM:SSF57850 | TIGR:cd16702 | TMHMM:TMhelix |
| MapMan:19.2.1.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:498939247..498945015
Molecular Weight (calculated)
101573.0 Da
IEP (calculated)
9.337
GRAVY (calculated)
0.606
Length
903 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVPPPETA LSSAADGSDD EDGDQCRICR FPAEADRPLR RPCACSGSIR FVHDDCLLRW LATSRQSRCE VCSREITISP LYAPNAPARL PLSEFMLGLA
101: NKVMGWVIVL LSLVVAVLVW EFIMPVTTLW TWRLALSRSF AQVRHLLSLR LSATSFFADG FYRFRFMPSV DTIFACVSIR RAFVRDLGHF RQLNGLARIG
201: ADAVAPFALW VARLETHLQN RFGGLDSLQV LALHTVEASL MVVIVDIGIA FMFGFVPFTL GRIILWCVSC FNFGNVDDVN SYASTAYILL IGYGFIFSLG
301: VTFGGMHTFH QYSRGERLLI AIFFKILADG TCWLLSPFRW LHRIHVMIRK TFSLCQMFFR GIANLITFAN FSLNVINMII VFPLLFGWSL DICTSKMFGA
401: TIHQRFKLLW ASSFSSITLH WLTGCIFLIL RSKLSSLLRP ILRPGVSIPF FHLAEEHNVK PCMREPFYII SFKKLPRLFV GIINVGMVFL VPVQIAGGLA
501: PKLFPLDIIY FDPPTKGTSF WQAPRTYAEL LSGIVLLRFL ICNTLKYLQP RKLVEKILRN WFATTGQALG LLDLLIVQPD GASGHEVSNS VAPNDQYGST
601: YEAMANRRSV AVRMTLLVVL AWLTVVILNT VVLIFPISVG RALLLAIPQL PVAGGLKSND LFAFAVGFCT ISTIIAASRD SFVYMTSGRT CILASVICKW
701: GITALKSSPL LFIWIVIIPI LIGLLVDFLL ISPFKFLVDF LVMSPFIVPS DDIPVLDFFS IWFLGMLLLK FWTNLAHWTR DAPFLAHFID GRWDWKLTRA
801: KDDGFAGLRA KWVLQDILMP ITMKLVIVLC VPYVLAKGLF PRFGYSAAVN STVYHFAWLG SLALYALCYL AKVFWGVLVK LHDSIRDERY IIGQRLQDYT
901: DNS
101: NKVMGWVIVL LSLVVAVLVW EFIMPVTTLW TWRLALSRSF AQVRHLLSLR LSATSFFADG FYRFRFMPSV DTIFACVSIR RAFVRDLGHF RQLNGLARIG
201: ADAVAPFALW VARLETHLQN RFGGLDSLQV LALHTVEASL MVVIVDIGIA FMFGFVPFTL GRIILWCVSC FNFGNVDDVN SYASTAYILL IGYGFIFSLG
301: VTFGGMHTFH QYSRGERLLI AIFFKILADG TCWLLSPFRW LHRIHVMIRK TFSLCQMFFR GIANLITFAN FSLNVINMII VFPLLFGWSL DICTSKMFGA
401: TIHQRFKLLW ASSFSSITLH WLTGCIFLIL RSKLSSLLRP ILRPGVSIPF FHLAEEHNVK PCMREPFYII SFKKLPRLFV GIINVGMVFL VPVQIAGGLA
501: PKLFPLDIIY FDPPTKGTSF WQAPRTYAEL LSGIVLLRFL ICNTLKYLQP RKLVEKILRN WFATTGQALG LLDLLIVQPD GASGHEVSNS VAPNDQYGST
601: YEAMANRRSV AVRMTLLVVL AWLTVVILNT VVLIFPISVG RALLLAIPQL PVAGGLKSND LFAFAVGFCT ISTIIAASRD SFVYMTSGRT CILASVICKW
701: GITALKSSPL LFIWIVIIPI LIGLLVDFLL ISPFKFLVDF LVMSPFIVPS DDIPVLDFFS IWFLGMLLLK FWTNLAHWTR DAPFLAHFID GRWDWKLTRA
801: KDDGFAGLRA KWVLQDILMP ITMKLVIVLC VPYVLAKGLF PRFGYSAAVN STVYHFAWLG SLALYALCYL AKVFWGVLVK LHDSIRDERY IIGQRLQDYT
901: DNS
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.