Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029598.1-P | Field mustard | cytosol | 86.67 | 47.56 |
| CDX68875 | Canola | plasma membrane | 11.85 | 7.55 |
| CDY08527 | Canola | plasma membrane | 12.59 | 5.09 |
| CDX68876 | Canola | cytosol | 9.63 | 4.85 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 11.11 | 4.13 |
| CDY70269 | Canola | plastid | 17.78 | 3.41 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 15.56 | 3.18 |
| CDX68874 | Canola | plasma membrane | 8.15 | 3.14 |
| CDX74093 | Canola | cytosol | 22.96 | 3.13 |
| CDY05287 | Canola | cytosol | 19.26 | 3.11 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 17.04 | 3.04 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 9.63 | 3.02 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 14.81 | 3.02 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 15.56 | 2.98 |
| CDY51866 | Canola | cytosol | 18.52 | 2.91 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 16.3 | 2.84 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 14.81 | 2.83 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 8.89 | 2.79 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 14.07 | 2.78 |
| CDY49274 | Canola | cytosol | 16.3 | 2.77 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 20.0 | 2.75 |
| CDY62724 | Canola | cytosol | 17.04 | 2.72 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 14.07 | 2.68 |
| CDY24673 | Canola | cytosol | 18.52 | 2.65 |
| CDY05286 | Canola | cytosol | 18.52 | 2.63 |
| CDY51956 | Canola | cytosol | 16.3 | 2.63 |
| CDX69024 | Canola | cytosol, plastid | 21.48 | 2.62 |
| CDX75396 | Canola | cytosol, plastid | 21.48 | 2.61 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 14.81 | 2.58 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 15.56 | 2.57 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 14.81 | 2.53 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 14.81 | 2.47 |
| CDX68877 | Canola | cytosol | 13.33 | 2.26 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 16.3 | 2.25 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 14.81 | 2.21 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 14.81 | 2.21 |
| Os08t0100400-01 | Rice | cytosol | 9.63 | 2.13 |
| CDX75270 | Canola | cytosol | 13.33 | 2.13 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 14.07 | 2.11 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 11.85 | 2.03 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 13.33 | 1.93 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 0.74 | 0.88 |
| Solyc01g020190.2.1 | Tomato | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY24672 | EnsemblPlantsGene:GSBRNA2T00027049001 | GO:A0A078GHM9 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ProteinID:CDY24672 | ProteinID:CDY24672.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF2837 | UniProt:A0A078GHM9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g30710DBnaA05g30710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHM9]
Coordinates
chrLK032162:+:280652..281139
Molecular Weight (calculated)
15434.4 Da
IEP (calculated)
9.471
GRAVY (calculated)
0.696
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLIVPWIVV ILLNSYFLSL HPWGQVAAAG FQSDFGVSRK FAYLSTISYI VALITIIALV RLEVGDVNVG RHMKILCDWC YHKSSHFMGL RVLIHIPPNP
101: PLHEFGIVRR LLFFFDDYAF ALLKVSIYPP LCLKT
101: PLHEFGIVRR LLFFFDDYAF ALLKVSIYPP LCLKT
001: MRASPYVRMV VPWAMAFILN TYCLSLHPLG QEVVVGFKRD YGMSTKSACF LNGLLYNGHL VFFMRIPIHE PIIARHPAGF QADILIKNVL GDGFVLVLWK
101: YNKIVCEWYY SLLQSFFGEP PRLVGVAVHE LGAIGRLLFF LDNKSFDALT ISICVSFFFI LLPFSFRWIA IAIVGGGGLF ENSPVILGYM MTLSIPFAYL
201: GIFLTLRQIS FPAIVRWFSL GYHFITKKLS CLLSKNLVSC QLFRD
101: YNKIVCEWYY SLLQSFFGEP PRLVGVAVHE LGAIGRLLFF LDNKSFDALT ISICVSFFFI LLPFSFRWIA IAIVGGGGLF ENSPVILGYM MTLSIPFAYL
201: GIFLTLRQIS FPAIVRWFSL GYHFITKKLS CLLSKNLVSC QLFRD
Arabidopsis Description
E3 ubiquitin ligase [Source:UniProtKB/TrEMBL;Acc:Q6E260]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.