Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G342100.2 | Wheat | cytosol | 92.78 | 93.04 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 90.37 | 89.86 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 48.73 | 45.5 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 41.93 | 43.34 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 53.68 | 42.02 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 47.31 | 40.93 |
| Os08t0100400-01 | Rice | cytosol | 30.17 | 34.92 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 5.24 | 32.74 |
| Solyc01g020190.2.1 | Tomato | plastid | 5.38 | 30.4 |
| Bra029598.1-P | Field mustard | cytosol | 8.78 | 25.2 |
| CDX68876 | Canola | cytosol | 9.07 | 23.88 |
| Bra011370.1-P | Field mustard | cytosol | 19.12 | 23.32 |
| CDX68874 | Canola | plasma membrane | 10.62 | 21.43 |
| AT4G32670.1 | Thale cress | cytosol | 24.5 | 20.12 |
| CDX75270 | Canola | cytosol | 23.23 | 19.41 |
| Bra001210.1-P | Field mustard | cytosol | 24.79 | 18.9 |
| TraesCS7D01G513500.2 | Wheat | cytosol | 30.74 | 18.76 |
| CDY05287 | Canola | cytosol | 22.1 | 18.66 |
| CDX68877 | Canola | cytosol | 20.82 | 18.44 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 25.64 | 18.43 |
| CDX68875 | Canola | plasma membrane | 5.52 | 18.4 |
| CDX74093 | Canola | cytosol | 24.79 | 17.68 |
| Bra029597.1-P | Field mustard | cytosol | 23.51 | 17.58 |
| CDY24673 | Canola | cytosol | 23.23 | 17.39 |
| CDY05286 | Canola | cytosol | 23.09 | 17.12 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 20.68 | 16.53 |
| CDY24672 | Canola | extracellular | 2.83 | 14.81 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 20.25 | 14.64 |
| CDY70269 | Canola | plastid | 12.89 | 12.93 |
| CDY08527 | Canola | plasma membrane | 4.39 | 9.28 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G330800.1 | EnsemblPlantsGene:TraesCS1D01G330800 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011016 | InterPro:IPR013083 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR13145 | PFAM:PF12906 |
| PFscan:PS51292 | SEG:seg | SMART:SM00744 | SUPFAM:SSF57850 | TIGR:cd16702 | TMHMM:TMhelix |
| MapMan:19.2.1.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:421031337..421035696
Molecular Weight (calculated)
77962.2 Da
IEP (calculated)
8.634
GRAVY (calculated)
0.509
Length
706 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADASPPET ALSAANGPGD EDGEEGEAEQ CRICRLPAEA DRPLRHPCAC RGSIRFVHDD CQLRWLATRR GPRCELCNND ISIRPVYAAD APARLPVSEF
101: MAGFSHKLMD LLLLLICLVP ALVMYLITLG AWLFALARSF AQVHHLLSLR PSVASIVAQT AIFILRLPGI ILRGVVGSIP SVALIVAQSA IFILRLPGIF
201: LRGVVRSIPA ANFCLNLLSA KILHPVFFGW ALDICTSEMF GATMSQRFKL MLASSFASTV LHWYFGCIFW HLGLRFFRLL DKILRPGIAI PFVHYEAHEP
301: FYKFYLKKLH ILFVGIISMV LVILVPIQIG GLLVPELFPF HITYFNCGAK GISFWQAPRN YVDSVSHALL LKFLIDNTKA LVYLEWLVKK VTQYSFVTTG
401: HALGLSDSLS IWPDDASGHD EIGSSVAPED QYDRINEAKD GRRSVAAATI LSLVLAWLTI VVFNLAVLIF PISIGHAITR LPLAGGLKSD DMLALAIGFG
501: AISTVIAASR DSFAYMTSGR THLLALNRYL VVFLWLVIAP FLTGVLVDLS LISPFTGLDD DVPAVGLSYY WGLGCLSLKI WGKQARRTRA RCLRAYFIDE
601: RWGPKLNQAK ADWDSGIAPM WWFLRDVCMP IVAKLLAALG VPYVLAKGVF PRFGCSVAMN SAVYRFVWLG SLGFYLAKAL CAKLHDSIRD ARYVVGQRLE
701: DVADGS
101: MAGFSHKLMD LLLLLICLVP ALVMYLITLG AWLFALARSF AQVHHLLSLR PSVASIVAQT AIFILRLPGI ILRGVVGSIP SVALIVAQSA IFILRLPGIF
201: LRGVVRSIPA ANFCLNLLSA KILHPVFFGW ALDICTSEMF GATMSQRFKL MLASSFASTV LHWYFGCIFW HLGLRFFRLL DKILRPGIAI PFVHYEAHEP
301: FYKFYLKKLH ILFVGIISMV LVILVPIQIG GLLVPELFPF HITYFNCGAK GISFWQAPRN YVDSVSHALL LKFLIDNTKA LVYLEWLVKK VTQYSFVTTG
401: HALGLSDSLS IWPDDASGHD EIGSSVAPED QYDRINEAKD GRRSVAAATI LSLVLAWLTI VVFNLAVLIF PISIGHAITR LPLAGGLKSD DMLALAIGFG
501: AISTVIAASR DSFAYMTSGR THLLALNRYL VVFLWLVIAP FLTGVLVDLS LISPFTGLDD DVPAVGLSYY WGLGCLSLKI WGKQARRTRA RCLRAYFIDE
601: RWGPKLNQAK ADWDSGIAPM WWFLRDVCMP IVAKLLAALG VPYVLAKGVF PRFGCSVAMN SAVYRFVWLG SLGFYLAKAL CAKLHDSIRD ARYVVGQRLE
701: DVADGS
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.