Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08527 | Canola | plasma membrane | 23.45 | 58.68 |
| CDY24673 | Canola | cytosol | 53.23 | 47.19 |
| CDY05286 | Canola | cytosol | 52.99 | 46.53 |
| CDX74093 | Canola | cytosol | 50.48 | 42.63 |
| CDX75270 | Canola | cytosol | 41.27 | 40.83 |
| CDX68874 | Canola | plasma membrane | 16.63 | 39.71 |
| CDX68877 | Canola | cytosol | 36.96 | 38.77 |
| CDX68876 | Canola | cytosol | 11.84 | 36.94 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 41.87 | 35.82 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.43 | 32.74 |
| CDX68875 | Canola | plasma membrane | 8.13 | 32.08 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.31 | 28.8 |
| CDY70269 | Canola | plastid | 23.33 | 27.7 |
| CDY62724 | Canola | cytosol | 25.6 | 25.3 |
| CDY49274 | Canola | cytosol | 23.68 | 24.97 |
| CDY51956 | Canola | cytosol | 24.88 | 24.82 |
| CDY51866 | Canola | cytosol | 25.48 | 24.77 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 19.62 | 23.1 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 21.41 | 22.6 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 18.9 | 22.44 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 20.93 | 22.24 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 18.66 | 22.1 |
| CDX69024 | Canola | cytosol, plastid | 28.59 | 21.57 |
| CDX75396 | Canola | cytosol, plastid | 28.59 | 21.53 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 22.73 | 21.06 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 17.11 | 20.94 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 22.61 | 20.91 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 16.39 | 20.73 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 22.37 | 20.71 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 16.27 | 20.51 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 18.54 | 20.5 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 23.21 | 19.76 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 21.77 | 19.49 |
| CDY24672 | Canola | extracellular | 3.11 | 19.26 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 18.42 | 18.87 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 17.46 | 18.86 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 17.94 | 18.54 |
| Os08t0100400-01 | Rice | cytosol | 12.92 | 17.7 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 16.39 | 17.68 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 6.94 | 15.98 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 7.54 | 14.65 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 7.3 | 14.19 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078EWE1 |
| EnsemblPlants:CDY05287 | ProteinID:CDY05287 | ProteinID:CDY05287.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00120114001 | InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 |
| SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EDCE22 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g45160D
Coordinates
chrLK031960:-:888705..892017
Molecular Weight (calculated)
95929.8 Da
IEP (calculated)
8.360
GRAVY (calculated)
0.613
Length
836 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVSPPEVDE SFSAEDDEDE DLCRICRSPE EPGNPLRYPC LCRGSIKFVH QDCLRTWLNR RRGNNKCEVC GRSYSFVPVY SENAPERLPC DEFLLGVLSR
101: AGRYLKLIVS WIVVILFNAF CNSLHPLGQQ VVADSQRVLA YLWVGLLYSS VIACSMLIVS MVRIDVGVGG LPGWFLADGD GLQGGVLHFL WKYLKILCDW
201: YYLKLILFLL QRRRRVILVP PVESLLDEFG VFRRLLFFFD DHVFAGLAIS VYVSTLFILL PFSIGWVVLA TVGGGSYLSG NSPVILGYMM MLSICFAYFE
301: ILFILQQSSL PVIVRWLSLG FHFITVTLPC HLLAFVAMAC KNILLIKDVF VLFFKFGALP WILGWFLGIC TSPMFGTRRL SCLIIAVSYM EHIQKIMHKR
401: AYWYLLDVTD PGYKITKLNL RHVFFVFASH GLLLVILFRL PMKAITLISP SFFPLELWDT DGSRFIGAAY AIYFNLMHAG PKWLIKLTKP AIELLVHKWI
501: VTICSWLQLR DLLLVVPRGE EDFHFTDDNP WLLLYSLAEG SMVTFYKSQN DEDDIKEQRH NRYRTRIAIM LMLAALSLFL VGTAFMVLPI LVGRVFSYSI
601: SFILRRVGIK HDDVCAFWTG CYILQAIYVS ICFAFDHIWT GRTDFLLKYI LIRIRNALLF SIWIVIIPGL LGLLIDLMII IPLRVPLNET PLYFLIQDWL
701: VGVVVLHIWT FLTMLTPIKC LATKAWRRKF ERIRSVGLNK LPSMWLLRDV IGSTISSLLT TLSIPCVLVK SLLPLLGYSQ SFNAATERFI WPASLALIVV
801: WFVIKLTLEI IIYLHQLIFN ERYMVGERVG DLTEDL
101: AGRYLKLIVS WIVVILFNAF CNSLHPLGQQ VVADSQRVLA YLWVGLLYSS VIACSMLIVS MVRIDVGVGG LPGWFLADGD GLQGGVLHFL WKYLKILCDW
201: YYLKLILFLL QRRRRVILVP PVESLLDEFG VFRRLLFFFD DHVFAGLAIS VYVSTLFILL PFSIGWVVLA TVGGGSYLSG NSPVILGYMM MLSICFAYFE
301: ILFILQQSSL PVIVRWLSLG FHFITVTLPC HLLAFVAMAC KNILLIKDVF VLFFKFGALP WILGWFLGIC TSPMFGTRRL SCLIIAVSYM EHIQKIMHKR
401: AYWYLLDVTD PGYKITKLNL RHVFFVFASH GLLLVILFRL PMKAITLISP SFFPLELWDT DGSRFIGAAY AIYFNLMHAG PKWLIKLTKP AIELLVHKWI
501: VTICSWLQLR DLLLVVPRGE EDFHFTDDNP WLLLYSLAEG SMVTFYKSQN DEDDIKEQRH NRYRTRIAIM LMLAALSLFL VGTAFMVLPI LVGRVFSYSI
601: SFILRRVGIK HDDVCAFWTG CYILQAIYVS ICFAFDHIWT GRTDFLLKYI LIRIRNALLF SIWIVIIPGL LGLLIDLMII IPLRVPLNET PLYFLIQDWL
701: VGVVVLHIWT FLTMLTPIKC LATKAWRRKF ERIRSVGLNK LPSMWLLRDV IGSTISSLLT TLSIPCVLVK SLLPLLGYSQ SFNAATERFI WPASLALIVV
801: WFVIKLTLEI IIYLHQLIFN ERYMVGERVG DLTEDL
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.