Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 80.55 | 89.13 |
| CDX68874 | Canola | plasma membrane | 20.68 | 57.71 |
| CDX68875 | Canola | plasma membrane | 11.46 | 52.83 |
| CDX68876 | Canola | cytosol | 12.59 | 45.9 |
| CDX75270 | Canola | cytosol | 37.46 | 43.31 |
| CDX68877 | Canola | cytosol | 34.39 | 42.16 |
| CDY05287 | Canola | cytosol | 35.82 | 41.87 |
| CDY24673 | Canola | cytosol | 35.01 | 36.27 |
| CDY05286 | Canola | cytosol | 35.11 | 36.03 |
| CDX74093 | Canola | cytosol | 34.49 | 34.04 |
| CDY70269 | Canola | plastid | 23.03 | 31.96 |
| CDY08527 | Canola | plasma membrane | 10.03 | 29.34 |
| CDY51866 | Canola | cytosol | 22.62 | 25.7 |
| CDY49274 | Canola | cytosol | 20.57 | 25.35 |
| CDY62724 | Canola | cytosol | 21.9 | 25.3 |
| CDY51956 | Canola | cytosol | 21.09 | 24.58 |
| CDX69024 | Canola | cytosol, plastid | 24.97 | 22.02 |
| CDX75396 | Canola | cytosol, plastid | 24.97 | 21.98 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 21.29 | 21.18 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 15.15 | 20.85 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 16.38 | 20.33 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 14.64 | 20.31 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 14.64 | 20.25 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 16.27 | 20.08 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 13.51 | 19.97 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 18.32 | 19.84 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 13.82 | 19.77 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 18.22 | 19.71 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 15.25 | 19.71 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 13.31 | 19.61 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 18.12 | 19.58 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 18.22 | 19.06 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 14.23 | 17.96 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 14.84 | 17.77 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 14.02 | 16.93 |
| CDY24672 | Canola | extracellular | 2.25 | 16.3 |
| Os08t0100400-01 | Rice | cytosol | 10.03 | 16.07 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 12.38 | 15.61 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 5.63 | 15.15 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 6.65 | 15.12 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 1.74 | 15.04 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 6.45 | 14.65 |
| Solyc01g020190.2.1 | Tomato | plastid | 1.64 | 12.8 |
Protein Annotations
| EnsemblPlants:CDX75269 | EnsemblPlantsGene:GSBRNA2T00121137001 | GO:A0A078CGL1 | PANTHER:PTHR13145 | ProteinID:CDX75269 | ProteinID:CDX75269.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDD8FE | MapMan:19.2.1.1.1.1 | : | : |
Description
BnaA01g04330D
Coordinates
chrLK031804:-:410478..419346
Molecular Weight (calculated)
112414.0 Da
IEP (calculated)
8.086
GRAVY (calculated)
0.381
Length
977 amino acids
Sequence
(BLAST)
(BLAST)
001: MDVLPAENED GGYDRALPAE ESDQYDDDDD DGGDLCRICR SPEGPNDPLR RFVTTIHVCF TKSSSTQVCR RSYSFVPVYS ENAPERLPWH EFVRGLSLRA
101: LRVAAYVFVF LFNAFCFSLH PWGRSTAIEN QRVFRVSEKF ALLLAGFLYN GWIAYIMTMM AVLKLAAEDI SWLVHREIHG ENEQGRVGGG GGGGVACAFW
201: KSVGILCDWW HDCLTRRGFF HAVLVEPREA VIRLRNPQLR EFGAVRRFLF LLDDNAFAVL AISFYVSFFF VLLPFMMGRL VILLFQRMGV ATQLLSGDDS
301: LPQELVVIGY WTMLSLSLAY LGSFSTLMWK NLYVVKLKEG FVLSLKFGVL PLVLGCWLDF CTLPILGITV SRRLEFVSDY PFVMIVHWVY GELYLLLVSN
401: SMELIQKILQ KRPFWFLLDV TDPNYKITKL YLGQLLFALA FHASLMVILV HLPIMTISFI SPSFFPLHLW FYEERIMFLS MAAYLWLGRI RVIDWLVDLI
501: QPAIEPIVHK WIIIVSSWLQ LRDFFLGNHA NQNVRPLLQQ GLEIADEWSQ VLSIAEGSLV SFYGSQHDTT SEDDTDDDRF IKLRIGLMLV LATVSLFLIS
601: TISMALPILV GRTFFHSISF ILDKFGLKHD DLYGFWIGCY ILRVTYIGAC FIINHIMIRR TDLLLNLVLL WIRNALLFSV WVSFIPMLLG LLIDLMIIIP
701: TQVPLSETPV YSFLRDWLIG LVVLHHWLLI ADSRLRLSPT PSSVTVVTTL APSTQRFNLR SRIHDIPWLS QHSARFKRVT ETSHRQDSPR DQADTRSVTR
801: RHRLEAFADQ KFTHQQRSSV LSNSQDEKSF VPRPLSLAAI FKLFVLHIWT YLTMFTRVNC FATVACREKL KRIRSVGINR LPWKWLLGKV ICPIIKTLLI
901: TLVFPFVVAN SLLPLLQFSG AVDLAVQRLI WPVLLAIIII GFIAKLTLDL FHYIHRLEYN DRYMVGDRVA DFIEDHS
101: LRVAAYVFVF LFNAFCFSLH PWGRSTAIEN QRVFRVSEKF ALLLAGFLYN GWIAYIMTMM AVLKLAAEDI SWLVHREIHG ENEQGRVGGG GGGGVACAFW
201: KSVGILCDWW HDCLTRRGFF HAVLVEPREA VIRLRNPQLR EFGAVRRFLF LLDDNAFAVL AISFYVSFFF VLLPFMMGRL VILLFQRMGV ATQLLSGDDS
301: LPQELVVIGY WTMLSLSLAY LGSFSTLMWK NLYVVKLKEG FVLSLKFGVL PLVLGCWLDF CTLPILGITV SRRLEFVSDY PFVMIVHWVY GELYLLLVSN
401: SMELIQKILQ KRPFWFLLDV TDPNYKITKL YLGQLLFALA FHASLMVILV HLPIMTISFI SPSFFPLHLW FYEERIMFLS MAAYLWLGRI RVIDWLVDLI
501: QPAIEPIVHK WIIIVSSWLQ LRDFFLGNHA NQNVRPLLQQ GLEIADEWSQ VLSIAEGSLV SFYGSQHDTT SEDDTDDDRF IKLRIGLMLV LATVSLFLIS
601: TISMALPILV GRTFFHSISF ILDKFGLKHD DLYGFWIGCY ILRVTYIGAC FIINHIMIRR TDLLLNLVLL WIRNALLFSV WVSFIPMLLG LLIDLMIIIP
701: TQVPLSETPV YSFLRDWLIG LVVLHHWLLI ADSRLRLSPT PSSVTVVTTL APSTQRFNLR SRIHDIPWLS QHSARFKRVT ETSHRQDSPR DQADTRSVTR
801: RHRLEAFADQ KFTHQQRSSV LSNSQDEKSF VPRPLSLAAI FKLFVLHIWT YLTMFTRVNC FATVACREKL KRIRSVGINR LPWKWLLGKV ICPIIKTLLI
901: TLVFPFVVAN SLLPLLQFSG AVDLAVQRLI WPVLLAIIII GFIAKLTLDL FHYIHRLEYN DRYMVGDRVA DFIEDHS
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.