Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05287 | Canola | cytosol | 58.68 | 23.45 |
| CDX68875 | Canola | plasma membrane | 11.38 | 17.92 |
| CDY24673 | Canola | cytosol | 43.71 | 15.48 |
| CDY05286 | Canola | cytosol | 43.71 | 15.34 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 14.67 | 13.5 |
| CDX74093 | Canola | cytosol | 39.82 | 13.43 |
| CDY70269 | Canola | plastid | 27.54 | 13.07 |
| CDY24672 | Canola | extracellular | 5.09 | 12.59 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 15.27 | 11.86 |
| CDX75270 | Canola | cytosol | 28.44 | 11.24 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 14.37 | 11.16 |
| CDX68877 | Canola | cytosol | 25.75 | 10.79 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 10.03 |
| CDX68876 | Canola | cytosol | 7.49 | 9.33 |
| Os08t0100400-01 | Rice | cytosol | 16.47 | 9.02 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 21.86 | 7.43 |
| CDY49274 | Canola | cytosol | 17.37 | 7.31 |
| CDY51956 | Canola | cytosol | 17.96 | 7.16 |
| CDY62724 | Canola | cytosol | 17.96 | 7.09 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 14.07 | 6.88 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 13.47 | 6.81 |
| CDX69024 | Canola | cytosol, plastid | 22.46 | 6.77 |
| CDX75396 | Canola | cytosol, plastid | 22.46 | 6.76 |
| CDY51866 | Canola | cytosol | 17.37 | 6.74 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 13.17 | 6.64 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 14.97 | 6.45 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 16.77 | 6.21 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 16.77 | 6.2 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 16.77 | 6.19 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 14.67 | 6.19 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 13.47 | 5.95 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 14.37 | 5.88 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 13.77 | 5.84 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 15.87 | 5.67 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 13.17 | 5.44 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 12.28 | 5.3 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 10.18 | 4.79 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 9.88 | 4.69 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 9.28 | 4.39 |
| CDX68874 | Canola | plasma membrane | 1.5 | 1.43 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 0.3 | 0.88 |
| Solyc01g020190.2.1 | Tomato | plastid | 0.3 | 0.8 |
Protein Annotations
| EnsemblPlants:CDY08527 | EnsemblPlantsGene:GSBRNA2T00000304001 | GO:A0A078F614 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| ProteinID:CDY08527 | ProteinID:CDY08527.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EDED6F | UniProt:A0A078F614 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA05g27630DBnaA05g27630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F614]
Coordinates
chrLK031986:+:569535..573600
Molecular Weight (calculated)
37546.6 Da
IEP (calculated)
9.835
GRAVY (calculated)
0.960
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTISKSKEI TVLSRAGRYL KLIVAWIVVI LFNVFCIALH PLGQEWVAGS QRVFMSRKLA FLWATLLYST VIASSMLILT TIRIQVGDLG GGRGDSFFGN
101: GGVVGAVLHL LSKYMKILCD WYFHKLIHFL GQPPRLIFLP PEAPLHEFGV IRRVLFFLDD DAFAVLAISV YVSSLFILLP FSIGWVVLAT VGGSYLSGNS
201: PVILGYMMML SICFAYFGIL FILHQNPFPL LARWFSLGFH FITVTLPCHL LAFLANILLI KDAFVLFFKF GVLPWILGWF LGICTSPMFG TRSFQIFEIL
301: SHNPCMMVAF RWLSGLSCLI IAVSYMKHIP KVIV
101: GGVVGAVLHL LSKYMKILCD WYFHKLIHFL GQPPRLIFLP PEAPLHEFGV IRRVLFFLDD DAFAVLAISV YVSSLFILLP FSIGWVVLAT VGGSYLSGNS
201: PVILGYMMML SICFAYFGIL FILHQNPFPL LARWFSLGFH FITVTLPCHL LAFLANILLI KDAFVLFFKF GVLPWILGWF LGICTSPMFG TRSFQIFEIL
301: SHNPCMMVAF RWLSGLSCLI IAVSYMKHIP KVIV
001: MRASPYVRMV VPWAMAFILN TYCLSLHPLG QEVVVGFKRD YGMSTKSACF LNGLLYNGHL VFFMRIPIHE PIIARHPAGF QADILIKNVL GDGFVLVLWK
101: YNKIVCEWYY SLLQSFFGEP PRLVGVAVHE LGAIGRLLFF LDNKSFDALT ISICVSFFFI LLPFSFRWIA IAIVGGGGLF ENSPVILGYM MTLSIPFAYL
201: GIFLTLRQIS FPAIVRWFSL GYHFITKKLS CLLSKNLVSC QLFRD
101: YNKIVCEWYY SLLQSFFGEP PRLVGVAVHE LGAIGRLLFF LDNKSFDALT ISICVSFFFI LLPFSFRWIA IAIVGGGGLF ENSPVILGYM MTLSIPFAYL
201: GIFLTLRQIS FPAIVRWFSL GYHFITKKLS CLLSKNLVSC QLFRD
Arabidopsis Description
E3 ubiquitin ligase [Source:UniProtKB/TrEMBL;Acc:Q6E260]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.