Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 40.41 | 73.95 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 41.17 | 48.87 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 42.44 | 47.44 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 50.06 | 43.58 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 43.58 | 42.4 |
| Os08t0100400-01 | Rice | cytosol | 32.15 | 41.48 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.19 | 29.2 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.32 | 27.2 |
| CDX68876 | Canola | cytosol | 8.51 | 25.0 |
| Bra011370.1-P | Field mustard | cytosol | 17.03 | 23.14 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 32.27 | 23.11 |
| Bra029598.1-P | Field mustard | cytosol | 7.12 | 22.76 |
| CDX68874 | Canola | plasma membrane | 9.66 | 21.71 |
| CDX75270 | Canola | cytosol | 23.13 | 21.54 |
| AT4G32670.1 | Thale cress | cytosol | 23.51 | 21.51 |
| CDX68875 | Canola | plasma membrane | 5.72 | 21.23 |
| CDY05287 | Canola | cytosol | 22.24 | 20.93 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 25.92 | 20.77 |
| CDX68877 | Canola | cytosol | 19.95 | 19.7 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 21.35 | 19.03 |
| Bra001210.1-P | Field mustard | cytosol | 22.11 | 18.79 |
| Bra029597.1-P | Field mustard | cytosol | 21.47 | 17.9 |
| CDY24673 | Canola | cytosol | 21.09 | 17.6 |
| CDX74093 | Canola | cytosol | 22.11 | 17.58 |
| CDY05286 | Canola | cytosol | 21.22 | 17.54 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 20.33 | 16.38 |
| CDY70269 | Canola | plastid | 14.61 | 16.34 |
| CDY08527 | Canola | plasma membrane | 5.84 | 13.77 |
| CDY24672 | Canola | extracellular | 2.03 | 11.85 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G465300.1 | EnsemblPlantsGene:TraesCS1B01G465300 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011016 | InterPro:IPR013083 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR13145 | PFAM:PF12906 |
| PFscan:PS51292 | SEG:seg | SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | MapMan:19.2.1.1.1.1 |
Description
No Description!
Coordinates
chr1B:-:676147398..676161697
Molecular Weight (calculated)
87448.5 Da
IEP (calculated)
9.056
GRAVY (calculated)
0.525
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAATPSPA TALLPADDPG HDADKEEEGE CRICRLPAEA DRPLHRPCGC RGSMRFVHDD CQLQWIARRR KLPRCEVCRR RISTRPLYAG DAPARLPVSE
101: LMAGLPTLLI GLLLPVFFAV CVVREFVVPL TTRWTWRLAL ATNFAQARHL LSLRLSMASW TCIPASAAFC LQFARLVVPF AVAPFARWVA RLLAQMQSLE
201: LGLFERLQFL AMSVVEVSLV VVIVDMGLAC FLCFLPFSLG RIILWSRSCL DVANEDEINC YTSTASTLLS GYGLMLKVGA TFAGAHTLYL YLRGKRLVIA
301: IFCRSLHAIF FRGNANSTTL ANESLNMLNN GIIDPLFFGW SLDLCTTELF GVTMSQRFKL LIASSFASAA LHWLIGISFL NLRLRLSRIL RKILGPGVAT
401: PFLGGTVSQP FYTFYLKRLV VLFLETIFIV LVISVPIKIV DLLAPMVFPL EIPYFDHPAR GTSVWQGPLN FTESLSGVIH MRYLIGKIVV YLATLVEWVM
501: GYWFVTTGQP LGKNVAAKDQ YGSSNDAKDD WRLAAVRTMP RAVLAWLTAV ILNSAVLLLP VSVGHALLFA VPQLPVGLKS NDLFAITVGL CIISTIIAAC
601: RDLSTRVISG KTRLLALQRH LLVCIWSVVI PLLTGLLVDL SMISPFFVGS DDEFPATSFF RTWLLGCIFK QLWIKCFVDK RRKAKLNRAK EDLSSELRPM
701: WWFFQDVCVP VVATLLAALG VPYVLARGVF PGLGYPANMN STAYRFAWSG SLGVCTLCWL TKALCVMLHD SIKDDRYAVG RRLEDVE
101: LMAGLPTLLI GLLLPVFFAV CVVREFVVPL TTRWTWRLAL ATNFAQARHL LSLRLSMASW TCIPASAAFC LQFARLVVPF AVAPFARWVA RLLAQMQSLE
201: LGLFERLQFL AMSVVEVSLV VVIVDMGLAC FLCFLPFSLG RIILWSRSCL DVANEDEINC YTSTASTLLS GYGLMLKVGA TFAGAHTLYL YLRGKRLVIA
301: IFCRSLHAIF FRGNANSTTL ANESLNMLNN GIIDPLFFGW SLDLCTTELF GVTMSQRFKL LIASSFASAA LHWLIGISFL NLRLRLSRIL RKILGPGVAT
401: PFLGGTVSQP FYTFYLKRLV VLFLETIFIV LVISVPIKIV DLLAPMVFPL EIPYFDHPAR GTSVWQGPLN FTESLSGVIH MRYLIGKIVV YLATLVEWVM
501: GYWFVTTGQP LGKNVAAKDQ YGSSNDAKDD WRLAAVRTMP RAVLAWLTAV ILNSAVLLLP VSVGHALLFA VPQLPVGLKS NDLFAITVGL CIISTIIAAC
601: RDLSTRVISG KTRLLALQRH LLVCIWSVVI PLLTGLLVDL SMISPFFVGS DDEFPATSFF RTWLLGCIFK QLWIKCFVDK RRKAKLNRAK EDLSSELRPM
701: WWFFQDVCVP VVATLLAALG VPYVLARGVF PGLGYPANMN STAYRFAWSG SLGVCTLCWL TKALCVMLHD SIKDDRYAVG RRLEDVE
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.