Factsheet for Bra011370.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75270	Canola	cytosol	68.91	47.22
CDX68877	Canola	cytosol	59.76	43.41
AT4G32670.1	Thale cress	cytosol	52.33	35.23
Bra029598.1-P	Field mustard	cytosol	12.95	30.49
Solyc01g020190.2.1	Tomato	plastid	5.35	24.8
GSMUA_Achr1P26090_001	Banana	cytosol, plastid	4.84	24.78
Bra011369.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.44	23.9
Bra001210.1-P	Field mustard	cytosol	38.0	23.76
Bra029597.1-P	Field mustard	cytosol	38.0	23.31
TraesCS1B01G342100.2	Wheat	cytosol	23.66	19.46
TraesCS1D01G330800.1	Wheat	cytosol	23.32	19.12
TraesCS1A01G328300.1	Wheat	cytosol	22.97	18.73
Bra017626.1-P	Field mustard	cytosol	25.91	17.75
TraesCS1A01G430800.1	Wheat	cytosol	20.21	17.7
TraesCS1B01G465500.1	Wheat	cytosol	20.21	17.65
TraesCS1B01G465300.1	Wheat	cytosol	23.14	17.03
HORVU5Hr1G098410.4	Barley	plasma membrane	23.14	16.92
TraesCS1D01G439900.1	Wheat	cytosol	20.73	15.87
HORVU1Hr1G093800.1	Barley	cytosol	21.07	15.76
TraesCS7D01G348000.2	Wheat	cytosol	24.52	15.74
TraesCS7A01G340400.1	Wheat	cytosol	24.52	15.73
TraesCS7B01G252000.1	Wheat	cytosol	24.18	15.49
Bra011487.1-P	Field mustard	cytosol, plastid	29.71	15.4
TraesCS1D01G440100.2	Wheat	cytosol, nucleus, plasma membrane	21.59	15.32
Bra034602.1-P	Field mustard	plasma membrane	21.76	15.14
TraesCS5D01G415200.1	Wheat	plasma membrane	17.44	14.79
HORVU7Hr1G083770.3	Barley	cytosol	23.83	14.78
TraesCS1B01G465700.1	Wheat	cytosol	20.55	14.71
Os08t0100400-01	Rice	cytosol	14.16	13.44
GSMUA_Achr1P26100_001	Banana	plasma membrane	21.76	12.83
HORVU1Hr1G093830.1	Barley	plasma membrane	16.93	12.65
TraesCS5A01G405100.1	Wheat	plasma membrane	7.25	11.57
TraesCS1B01G465200.1	Wheat	plasma membrane	7.6	10.23
TraesCS1A01G430500.1	Wheat	plasma membrane	7.25	9.77

Protein Annotations

MapMan:19.2.1.1.1.1	Gene3D:3.30.40.10	EnsemblPlantsGene:Bra011370	EnsemblPlants:Bra011370.1	EnsemblPlants:Bra011370.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0008270	GO:GO:0016020	GO:GO:0016021	GO:GO:0046872
InterPro:IPR011016	InterPro:IPR013083	UniProt:M4D4G6	PFAM:PF12906	PFscan:PS51292	PANTHER:PTHR13145
SMART:SM00744	SUPFAM:SSF57850	TMHMM:TMhelix	UniParc:UPI0002546253	InterPro:Znf_RING-CH	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

AT4G32670 (E=7e-083) | zinc ion binding

Coordinates

chrA01:+:2503197..2506397

Molecular Weight (calculated)

67492.5 Da

IEP (calculated)

8.523

GRAVY (calculated)

0.298

Length

579 amino acids

Sequence
(BLAST)

001: METENKEAVP TEAKDMKNED VDICRICQSP EEPNNPLRHP CACRGSLKYV HTDCIFLWIN RRRSKHCEIC KRSYSIVPVY SDNAPEKLPC QELLMSLLLR
101: AFRFMTLILP WLLAITFHSH CMLFLESKRD FELSCFFLGL LYTVEIVTEI TFIVVLRVVY EELVRTEHEL LRTVHLIANG LRHKGVTRVL IVLWKYMRIL
201: CDWWHDQLLQ LPFFHDMFMR GPLALAFVPR NTQLHEFGAI RRFLFFLDDN TLAIVQKRAF WYLLDVTGPN YKITKLHLRS LLFAFAFHGA VVVIVFHFPI
301: KTITLINRSF FPLKFGWLAN SIKQSIKPIV HKWITVVSSC LKLSGFLVRR DGMNHNVRLA FGIAEGSMVS FYGSQRDTTC EDDAHEQRDE RYIYKLTRLL
401: INLDEQIFVV PGLLGLLINL MIIIPSQVPL DESPVYNFLH HWLIGVYVLH ICIALTMFTP VTCFATVAWR EKLQRIRSVG INHLPFTWLI RDVIGSAINT
501: LLTALCVPYV LVNSLLPVLG FSREANLSVQ RFVWPALLAF MVIWFSAKLV RNLIIYLHQV EFDNRYKVGE RLVDFTEDL

Best Arabidopsis Sequence Match ( AT4G32670.1 )
(BLAST)

001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE

Arabidopsis Description

RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.