Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75270 | Canola | cytosol | 85.82 | 80.95 |
| Bra011370.1-P | Field mustard | cytosol | 43.41 | 59.76 |
| AT4G32670.1 | Thale cress | cytosol | 54.83 | 50.81 |
| CDY05287 | Canola | cytosol | 38.77 | 36.96 |
| CDX68874 | Canola | plasma membrane | 15.31 | 34.86 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 42.16 | 34.39 |
| CDY05286 | Canola | cytosol | 40.15 | 33.61 |
| CDY24673 | Canola | cytosol | 39.65 | 33.51 |
| CDX74093 | Canola | cytosol | 40.03 | 32.22 |
| CDX68875 | Canola | plasma membrane | 8.53 | 32.08 |
| CDY70269 | Canola | plastid | 25.72 | 29.12 |
| CDX68876 | Canola | cytosol | 8.78 | 26.12 |
| CDY08527 | Canola | plasma membrane | 10.79 | 25.75 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 3.51 | 24.78 |
| Solyc01g020190.2.1 | Tomato | plastid | 3.76 | 24.0 |
| CDY49274 | Canola | cytosol | 22.96 | 23.08 |
| CDY51956 | Canola | cytosol | 24.22 | 23.03 |
| CDY62724 | Canola | cytosol | 24.34 | 22.93 |
| CDY51866 | Canola | cytosol | 24.09 | 22.33 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 18.82 | 21.31 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 18.44 | 20.82 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 18.32 | 20.56 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 19.7 | 19.95 |
| CDX69024 | Canola | cytosol, plastid | 27.6 | 19.86 |
| CDX75396 | Canola | cytosol, plastid | 27.6 | 19.82 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 18.95 | 19.07 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 23.21 | 18.84 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 21.2 | 18.74 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 21.2 | 18.69 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 21.08 | 18.6 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 20.83 | 17.77 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 14.68 | 17.65 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 16.69 | 17.59 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 17.94 | 17.52 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 14.3 | 17.25 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 14.68 | 17.13 |
| Os08t0100400-01 | Rice | cytosol | 12.92 | 16.89 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 16.06 | 16.54 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 16.06 | 15.82 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 14.93 | 15.35 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 6.65 | 14.6 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 7.65 | 14.19 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 7.65 | 14.19 |
| CDY24672 | Canola | extracellular | 2.26 | 13.33 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078BX52 |
| EnsemblPlants:CDX68877 | ProteinID:CDX68877 | ProteinID:CDX68877.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00130602001 | InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 |
| SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EEB9C2 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC01g05760D
Coordinates
chrLK031789:-:1684148..1687578
Molecular Weight (calculated)
92754.3 Da
IEP (calculated)
8.474
GRAVY (calculated)
0.432
Length
797 amino acids
Sequence
(BLAST)
(BLAST)
001: METENKEAVQ TEAKDMKNED VDICRICQSP EEPNPLRHPC ACRGSLKYVH TDCIFLWINR RRRKHCEICK RSYSIVPVYS DNAPERLPCQ ELLKSLLLRA
101: FRFMTLILPS LLAITFHSYC MFFLESKRVF ELSCFFLGLI YTVEIVTEIT FIVVLRVVYE ELVRTEHELL RRVHLIANGL RHKGVTRVLL VLWKYMRVLC
201: DWWHDQLLQL PFFHDMFMRG PLALAFVPRN TQLDEFGSIR RFLFFLDDNT FSVLAINISW SFLDYMLPYL IGQAVFVFLR CVPPHGWVLE NISEITVGHI
301: VLFSVWLAYL KSVFTLIRNP TRTRWFSLSV KDTLILCFKT ILLPWMLGFW IDFCTFPLTG ATVSQRLEVV SDYPHVAAKH WCVGIGYLLV ALSCMKLIQE
401: IVQKRAFWYL LDVTEPNYKI TKLHLRSLLF AFAFHGAVVV IVFHLPIKTI TLTIQVYKDE FILGLLAAYI CCPMRLSNSV KQSIKPIVHK WVVAVSSCLK
501: LSDFLVRRDG VNHNVRVTFG IAEGSMVSFY GSQRDTACEE DTHEQRDERF MLRIGMLLVI AALSMFLVST TFMAVPVLVG RAFFHSISFY MLSFGLEHDD
601: ICAFWIGLCI MRKIYKITCF VYDHIVTGRV DLLLKHVMKW IQNVLLFSIW IFVVPGLLGL LINLMIIIPS QVPLDESPVY NFLHDWVIGL YVLHICIALT
701: MFTPVTCFAT VAWREKLQRI RSVGINNLPF TWLIRDVIGS AINKHTSNYS LRPLRDALMV IWFSAKLVRN LIVYLHQVEF DNRYKVGERL VDFTEDL
101: FRFMTLILPS LLAITFHSYC MFFLESKRVF ELSCFFLGLI YTVEIVTEIT FIVVLRVVYE ELVRTEHELL RRVHLIANGL RHKGVTRVLL VLWKYMRVLC
201: DWWHDQLLQL PFFHDMFMRG PLALAFVPRN TQLDEFGSIR RFLFFLDDNT FSVLAINISW SFLDYMLPYL IGQAVFVFLR CVPPHGWVLE NISEITVGHI
301: VLFSVWLAYL KSVFTLIRNP TRTRWFSLSV KDTLILCFKT ILLPWMLGFW IDFCTFPLTG ATVSQRLEVV SDYPHVAAKH WCVGIGYLLV ALSCMKLIQE
401: IVQKRAFWYL LDVTEPNYKI TKLHLRSLLF AFAFHGAVVV IVFHLPIKTI TLTIQVYKDE FILGLLAAYI CCPMRLSNSV KQSIKPIVHK WVVAVSSCLK
501: LSDFLVRRDG VNHNVRVTFG IAEGSMVSFY GSQRDTACEE DTHEQRDERF MLRIGMLLVI AALSMFLVST TFMAVPVLVG RAFFHSISFY MLSFGLEHDD
601: ICAFWIGLCI MRKIYKITCF VYDHIVTGRV DLLLKHVMKW IQNVLLFSIW IFVVPGLLGL LINLMIIIPS QVPLDESPVY NFLHDWVIGL YVLHICIALT
701: MFTPVTCFAT VAWREKLQRI RSVGINNLPF TWLIRDVIGS AINKHTSNYS LRPLRDALMV IWFSAKLVRN LIVYLHQVEF DNRYKVGERL VDFTEDL
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.