Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001210.1-P | Field mustard | cytosol | 84.95 | 90.82 |
| CDY24673 | Canola | cytosol | 50.81 | 53.34 |
| CDY05286 | Canola | cytosol | 51.11 | 53.15 |
| CDY05287 | Canola | cytosol | 42.63 | 50.48 |
| CDX75270 | Canola | cytosol | 35.66 | 41.78 |
| CDX68877 | Canola | cytosol | 32.22 | 40.03 |
| CDY08527 | Canola | plasma membrane | 13.43 | 39.82 |
| CDX68874 | Canola | plasma membrane | 13.94 | 39.43 |
| CDX68875 | Canola | plasma membrane | 7.47 | 34.91 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 34.04 | 34.49 |
| CDX68876 | Canola | cytosol | 8.38 | 30.97 |
| CDY70269 | Canola | plastid | 19.7 | 27.7 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 3.03 | 26.55 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 18.59 | 25.92 |
| CDY51866 | Canola | cytosol | 22.32 | 25.7 |
| Solyc01g020190.2.1 | Tomato | plastid | 3.23 | 25.6 |
| CDY51956 | Canola | cytosol | 21.52 | 25.42 |
| CDY62724 | Canola | cytosol | 21.72 | 25.41 |
| CDY49274 | Canola | cytosol | 20.1 | 25.09 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 17.78 | 25.0 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 17.68 | 24.79 |
| CDY24672 | Canola | extracellular | 3.13 | 22.96 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 18.28 | 22.85 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 17.58 | 22.11 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 14.55 | 21.72 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 16.46 | 21.56 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 14.85 | 21.52 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 19.6 | 21.48 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 19.39 | 21.29 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 16.57 | 21.19 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 19.29 | 21.13 |
| CDX69024 | Canola | cytosol, plastid | 23.64 | 21.12 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 14.04 | 21.03 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 17.27 | 20.96 |
| CDX75396 | Canola | cytosol, plastid | 23.43 | 20.9 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 16.67 | 20.4 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 18.89 | 20.02 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 19.39 | 19.55 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 15.15 | 19.35 |
| Os08t0100400-01 | Rice | cytosol | 11.82 | 19.18 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 7.27 | 16.74 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 7.17 | 16.51 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 5.76 | 15.7 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078CGL7 |
| EnsemblPlants:CDX74093 | ProteinID:CDX74093 | ProteinID:CDX74093.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00111845001 | InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 |
| SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EE4C5B | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g29540D
Coordinates
chrLK031800:+:1264297..1268745
Molecular Weight (calculated)
114118.0 Da
IEP (calculated)
8.031
GRAVY (calculated)
0.429
Length
990 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQLGGSDQS FSHEEQEEDG EEKLCRICRS AEEPGNPLTH PCSCRGSIKY VHHDCLLIWL NRRGYKQCEV CGRSYSYVPV YSESAPERLP CKEFLIEVLL
101: RAVKLIVPWL AVILLNTYFV SFHPWAQELA AAHSRNDSWM SRRLAYWHPG LLYSILVVSF MTMMTTIMVT EVGDVDVRRF GRVVEVLWKH MTILCVWYHR
201: KLGRVFDQPQ RPIVHAEIHE FGVIRELLFF LDDDAFALLA ISVYVSTLFV LLPVWIGWAV LATVGGSFLF GNSPVTLGYV TLLSTCFAYF TLPLIPFPAI
301: VRWVSLGVHF TALKLPCLLW DFSVKSCKAL QSQTSFPAIV KWFSLGFHYI AVILPPLLWI FIKEASVLCF KIGVVPWMIG YWLEICTSPL FGTSFFLRFE
401: TLSDFPGMTT LRWVAGTLCL FVAESFMKRI QEIVHKRAFW YLVDVTDPDY DITKMNFGYT LFALASHCVS LVIMFHLPIR AITLISPSFF PLVLWVMDEK
501: VSLGARFVYF RLLTSSPKWL IGLTKPAVEL LVQKWVITVS SWLELSDFLL VAPRGEDFDQ NVRPVMQPRS FLLFCSLAEG SMVTLHGSQN DEDDVKDQRD
601: NRFLLRIVLM LMLAALSLFI VSTAFMALPI LLGRVFLEFI SSLMLRYFGL KRDDLCAFWI GYSTLEEIYT FTCFAYDQIH KGRIDVLLRD IRNGLLFFIW
701: ITVVPGLLGL LIDLMIIIPT RVPLDESPVY FLFQDWLIGV VVLHIWALLT MLTPINWFAT KALRRKFKRI RTVGIDRLPS MWLLREVIGS IAITLLITLS
801: FPYLLVKYLI PLLGYQESVN SAVERLIWPA LFALVVVWFM VKLTREVVIY VHQLVFNERY MVGERSCVYK SMECVTNNDS FVDNQNMLLS LVMVNFDLLA
901: HGKDKEENSF INISPRGRSQ QSDKKVQCYE PATMKYLGYF PALSTAEISS FCERVTLSRK ARAQSSFKVR RQFLRILLKY IVEHQELICE
101: RAVKLIVPWL AVILLNTYFV SFHPWAQELA AAHSRNDSWM SRRLAYWHPG LLYSILVVSF MTMMTTIMVT EVGDVDVRRF GRVVEVLWKH MTILCVWYHR
201: KLGRVFDQPQ RPIVHAEIHE FGVIRELLFF LDDDAFALLA ISVYVSTLFV LLPVWIGWAV LATVGGSFLF GNSPVTLGYV TLLSTCFAYF TLPLIPFPAI
301: VRWVSLGVHF TALKLPCLLW DFSVKSCKAL QSQTSFPAIV KWFSLGFHYI AVILPPLLWI FIKEASVLCF KIGVVPWMIG YWLEICTSPL FGTSFFLRFE
401: TLSDFPGMTT LRWVAGTLCL FVAESFMKRI QEIVHKRAFW YLVDVTDPDY DITKMNFGYT LFALASHCVS LVIMFHLPIR AITLISPSFF PLVLWVMDEK
501: VSLGARFVYF RLLTSSPKWL IGLTKPAVEL LVQKWVITVS SWLELSDFLL VAPRGEDFDQ NVRPVMQPRS FLLFCSLAEG SMVTLHGSQN DEDDVKDQRD
601: NRFLLRIVLM LMLAALSLFI VSTAFMALPI LLGRVFLEFI SSLMLRYFGL KRDDLCAFWI GYSTLEEIYT FTCFAYDQIH KGRIDVLLRD IRNGLLFFIW
701: ITVVPGLLGL LIDLMIIIPT RVPLDESPVY FLFQDWLIGV VVLHIWALLT MLTPINWFAT KALRRKFKRI RTVGIDRLPS MWLLREVIGS IAITLLITLS
801: FPYLLVKYLI PLLGYQESVN SAVERLIWPA LFALVVVWFM VKLTREVVIY VHQLVFNERY MVGERSCVYK SMECVTNNDS FVDNQNMLLS LVMVNFDLLA
901: HGKDKEENSF INISPRGRSQ QSDKKVQCYE PATMKYLGYF PALSTAEISS FCERVTLSRK ARAQSSFKVR RQFLRILLKY IVEHQELICE
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.