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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY62724 Canola cytosol 67.44 68.56
CDY51956 Canola cytosol 66.05 67.78
CDY49274 Canola cytosol 55.0 59.65
CDX69024 Canola cytosol, plastid 71.05 55.14
CDX75396 Canola cytosol, plastid 71.05 55.05
Solyc01g107880.2.1 Tomato plasma membrane, plastid 63.37 49.01
PGSC0003DMT400066581 Potato plasma membrane, plastid 63.37 48.97
KRH70672 Soybean plasma membrane, plastid 63.84 48.84
VIT_03s0063g00080.t01 Wine grape plasma membrane 63.02 48.83
KRH50333 Soybean mitochondrion 63.72 48.75
KXG20452 Sorghum cytosol 57.56 45.58
Os06t0639100-02 Rice cytosol, peroxisome, plasma membrane 57.56 45.5
Zm00001d036765_P003 Maize cytosol 56.4 44.7
TraesCS7B01G442100.1 Wheat cytosol 57.09 44.68
TraesCS7A01G524600.2 Wheat cytosol 56.98 44.59
Zm00001d046624_P005 Maize cytosol 56.86 44.41
HORVU7Hr1G116420.2 Barley cytosol, mitochondrion, plasma membrane 56.51 42.45
TraesCS7D01G513500.2 Wheat cytosol 56.74 42.18
GSMUA_Achr3P13170_001 Banana plasma membrane 44.77 39.13
CDX68876 Canola cytosol 9.19 29.48
CDX68874 Canola plasma membrane 11.05 27.14
CDX68875 Canola plasma membrane 6.4 25.94
CDY05287 Canola cytosol 24.77 25.48
CDX68877 Canola cytosol 22.33 24.09
CDX75270 Canola cytosol 23.6 24.02
CDY05286 Canola cytosol 25.35 22.9
CDY24673 Canola cytosol 25.0 22.8
CDX75269 Canola cytosol, peroxisome, plasma membrane 25.7 22.62
CDX74093 Canola cytosol 25.7 22.32
CDY70269 Canola plastid 16.86 20.6
CDY24672 Canola extracellular 2.91 18.52
CDY08527 Canola plasma membrane 6.74 17.37
Protein Annotations
KEGG:00220+6.3.2.-KEGG:00261+6.3.2.-KEGG:00380+6.3.2.-MapMan:19.2.1.1.1.1Gene3D:3.30.40.10GO:A0A078IPI0
UniProt:A0A078IPI0EnsemblPlants:CDY51866ProteinID:CDY51866ProteinID:CDY51866.1GO:GO:0003674GO:GO:0005488
GO:GO:0005575GO:GO:0008270GO:GO:0016020GO:GO:0016021GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00004435001
InterPro:IPR011016InterPro:IPR013083PFAM:PF12906PFscan:PS51292PANTHER:PTHR13145SMART:SM00744
SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI0004EEBD25InterPro:Znf_RING-CHInterPro:Znf_RING/FYVE/PHDSEG:seg
Description
BnaC03g77180DBnaC03g77180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPI0]
Coordinates
chrLK033035:+:82458..85647
Molecular Weight (calculated)
97350.1 Da
IEP (calculated)
7.666
GRAVY (calculated)
0.491
Length
860 amino acids
Sequence
(BLAST)
001: MAHTTATARY IDDEEGDEDV CRICRTPGDT DNPLQYPCAC RGSIKFVHQD CLLQWLSYCK AHQCEVCKHR FSFSPLYAEH APTRLPFNEF VVGIGMKVCS
101: CRALHVFLRL CLVLSVWFLT IPFITFWTWR LAFVQSFGEA QRLFLSHMST VVVLADCLLG FLLSTTIIFI LSGAATLRDY FRHLRMYFQF YVRFGMHGPV
201: YDNAAFPVLA SNMIFLGVVI FVPFTLGRFI LYHVLCVFAD ARGPASVSNL THEGQENGLV SHLLKCFVAG AGPPKLYVAT TCTDGHMFGD CLVFIYLGLI
301: PLIQYLKGEP LTAGRFYGGV ASIVETIPPL LRQFYGGVVF VLMLGVVPLM CGWLLDVCTV KVFGKTMSHR VEFLSVSPLA SSLVHWVVGL LYLLKIIIFE
401: ELLQQVLRPG VLNFFYDPEY EDDTFQLFIE EPVHKLARNV LLDSAKLGSL IVLLVFLPVK LAIRMAPSIF PLNISVSDPF TEIPAGMLLF TICTQFIIEH
501: FRLWTAVESL VRFWFTCVGW ALGLTDFLLP RPEDNVGQDN GNGEPGRQNR GQSDSERYNF VLRIVLLLLA AWITLLLFNT TLIVVPVSVG RALFNAIPTL
601: PITHGIIKYN DLYAYVIGTY AFWTTISGAM YTIEHVKSKR TSRKEIWKWC EIVFKSSVLL AIWVFVIPVL IGLVFELLVI VPMRVPVDES PVFLLYQDWP
701: LGLIVLKIWS TLHVTKNDNN GQIILLDDSW KAKFERVEGD RFSRLQGLWV FREILFPIVM KLLTALCVPY VLARGVFPML GYPLVVNSAV YRYAWIGCLS
801: VSLVCFCANR CHVWFRNLHN SIRDDRYLIG RRLHNFGEAV LAHQNQSSED AGDGGVLTGR
Best Arabidopsis Sequence Match ( AT4G34100.1 )
(BLAST)
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.