Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY62724 | Canola | cytosol | 67.44 | 68.56 |
CDY51956 | Canola | cytosol | 66.05 | 67.78 |
CDY49274 | Canola | cytosol | 55.0 | 59.65 |
CDX69024 | Canola | cytosol, plastid | 71.05 | 55.14 |
CDX75396 | Canola | cytosol, plastid | 71.05 | 55.05 |
Solyc01g107880.2.1 | Tomato | plasma membrane, plastid | 63.37 | 49.01 |
PGSC0003DMT400066581 | Potato | plasma membrane, plastid | 63.37 | 48.97 |
KRH70672 | Soybean | plasma membrane, plastid | 63.84 | 48.84 |
VIT_03s0063g00080.t01 | Wine grape | plasma membrane | 63.02 | 48.83 |
KRH50333 | Soybean | mitochondrion | 63.72 | 48.75 |
KXG20452 | Sorghum | cytosol | 57.56 | 45.58 |
Os06t0639100-02 | Rice | cytosol, peroxisome, plasma membrane | 57.56 | 45.5 |
Zm00001d036765_P003 | Maize | cytosol | 56.4 | 44.7 |
TraesCS7B01G442100.1 | Wheat | cytosol | 57.09 | 44.68 |
TraesCS7A01G524600.2 | Wheat | cytosol | 56.98 | 44.59 |
Zm00001d046624_P005 | Maize | cytosol | 56.86 | 44.41 |
HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 56.51 | 42.45 |
TraesCS7D01G513500.2 | Wheat | cytosol | 56.74 | 42.18 |
GSMUA_Achr3P13170_001 | Banana | plasma membrane | 44.77 | 39.13 |
CDX68876 | Canola | cytosol | 9.19 | 29.48 |
CDX68874 | Canola | plasma membrane | 11.05 | 27.14 |
CDX68875 | Canola | plasma membrane | 6.4 | 25.94 |
CDY05287 | Canola | cytosol | 24.77 | 25.48 |
CDX68877 | Canola | cytosol | 22.33 | 24.09 |
CDX75270 | Canola | cytosol | 23.6 | 24.02 |
CDY05286 | Canola | cytosol | 25.35 | 22.9 |
CDY24673 | Canola | cytosol | 25.0 | 22.8 |
CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 25.7 | 22.62 |
CDX74093 | Canola | cytosol | 25.7 | 22.32 |
CDY70269 | Canola | plastid | 16.86 | 20.6 |
CDY24672 | Canola | extracellular | 2.91 | 18.52 |
CDY08527 | Canola | plasma membrane | 6.74 | 17.37 |
Protein Annotations
KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078IPI0 |
UniProt:A0A078IPI0 | EnsemblPlants:CDY51866 | ProteinID:CDY51866 | ProteinID:CDY51866.1 | GO:GO:0003674 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00004435001 |
InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EEBD25 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC03g77180DBnaC03g77180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPI0]
Coordinates
chrLK033035:+:82458..85647
Molecular Weight (calculated)
97350.1 Da
IEP (calculated)
7.666
GRAVY (calculated)
0.491
Length
860 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHTTATARY IDDEEGDEDV CRICRTPGDT DNPLQYPCAC RGSIKFVHQD CLLQWLSYCK AHQCEVCKHR FSFSPLYAEH APTRLPFNEF VVGIGMKVCS
101: CRALHVFLRL CLVLSVWFLT IPFITFWTWR LAFVQSFGEA QRLFLSHMST VVVLADCLLG FLLSTTIIFI LSGAATLRDY FRHLRMYFQF YVRFGMHGPV
201: YDNAAFPVLA SNMIFLGVVI FVPFTLGRFI LYHVLCVFAD ARGPASVSNL THEGQENGLV SHLLKCFVAG AGPPKLYVAT TCTDGHMFGD CLVFIYLGLI
301: PLIQYLKGEP LTAGRFYGGV ASIVETIPPL LRQFYGGVVF VLMLGVVPLM CGWLLDVCTV KVFGKTMSHR VEFLSVSPLA SSLVHWVVGL LYLLKIIIFE
401: ELLQQVLRPG VLNFFYDPEY EDDTFQLFIE EPVHKLARNV LLDSAKLGSL IVLLVFLPVK LAIRMAPSIF PLNISVSDPF TEIPAGMLLF TICTQFIIEH
501: FRLWTAVESL VRFWFTCVGW ALGLTDFLLP RPEDNVGQDN GNGEPGRQNR GQSDSERYNF VLRIVLLLLA AWITLLLFNT TLIVVPVSVG RALFNAIPTL
601: PITHGIIKYN DLYAYVIGTY AFWTTISGAM YTIEHVKSKR TSRKEIWKWC EIVFKSSVLL AIWVFVIPVL IGLVFELLVI VPMRVPVDES PVFLLYQDWP
701: LGLIVLKIWS TLHVTKNDNN GQIILLDDSW KAKFERVEGD RFSRLQGLWV FREILFPIVM KLLTALCVPY VLARGVFPML GYPLVVNSAV YRYAWIGCLS
801: VSLVCFCANR CHVWFRNLHN SIRDDRYLIG RRLHNFGEAV LAHQNQSSED AGDGGVLTGR
101: CRALHVFLRL CLVLSVWFLT IPFITFWTWR LAFVQSFGEA QRLFLSHMST VVVLADCLLG FLLSTTIIFI LSGAATLRDY FRHLRMYFQF YVRFGMHGPV
201: YDNAAFPVLA SNMIFLGVVI FVPFTLGRFI LYHVLCVFAD ARGPASVSNL THEGQENGLV SHLLKCFVAG AGPPKLYVAT TCTDGHMFGD CLVFIYLGLI
301: PLIQYLKGEP LTAGRFYGGV ASIVETIPPL LRQFYGGVVF VLMLGVVPLM CGWLLDVCTV KVFGKTMSHR VEFLSVSPLA SSLVHWVVGL LYLLKIIIFE
401: ELLQQVLRPG VLNFFYDPEY EDDTFQLFIE EPVHKLARNV LLDSAKLGSL IVLLVFLPVK LAIRMAPSIF PLNISVSDPF TEIPAGMLLF TICTQFIIEH
501: FRLWTAVESL VRFWFTCVGW ALGLTDFLLP RPEDNVGQDN GNGEPGRQNR GQSDSERYNF VLRIVLLLLA AWITLLLFNT TLIVVPVSVG RALFNAIPTL
601: PITHGIIKYN DLYAYVIGTY AFWTTISGAM YTIEHVKSKR TSRKEIWKWC EIVFKSSVLL AIWVFVIPVL IGLVFELLVI VPMRVPVDES PVFLLYQDWP
701: LGLIVLKIWS TLHVTKNDNN GQIILLDDSW KAKFERVEGD RFSRLQGLWV FREILFPIVM KLLTALCVPY VLARGVFPML GYPLVVNSAV YRYAWIGCLS
801: VSLVCFCANR CHVWFRNLHN SIRDDRYLIG RRLHNFGEAV LAHQNQSSED AGDGGVLTGR
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.