Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51956 | Canola | cytosol | 84.4 | 85.2 |
| Bra034602.1-P | Field mustard | plasma membrane | 79.67 | 81.01 |
| CDY51866 | Canola | cytosol | 68.56 | 67.44 |
| CDY49274 | Canola | cytosol | 56.86 | 60.66 |
| CDX69024 | Canola | cytosol, plastid | 69.5 | 53.07 |
| CDX75396 | Canola | cytosol, plastid | 69.5 | 52.97 |
| KRH50333 | Soybean | mitochondrion | 62.65 | 47.15 |
| PGSC0003DMT400066581 | Potato | plasma membrane, plastid | 61.94 | 47.08 |
| Solyc01g107880.2.1 | Tomato | plasma membrane, plastid | 61.7 | 46.94 |
| VIT_03s0063g00080.t01 | Wine grape | plasma membrane | 61.58 | 46.94 |
| KRH70672 | Soybean | plasma membrane, plastid | 62.17 | 46.8 |
| Os06t0639100-02 | Rice | cytosol, peroxisome, plasma membrane | 55.91 | 43.47 |
| KXG20452 | Sorghum | cytosol | 55.56 | 43.28 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 55.67 | 42.86 |
| TraesCS7A01G524600.2 | Wheat | cytosol | 55.44 | 42.68 |
| Zm00001d036765_P003 | Maize | cytosol | 54.73 | 42.67 |
| Zm00001d046624_P005 | Maize | cytosol | 55.08 | 42.33 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 55.08 | 40.7 |
| TraesCS7D01G513500.2 | Wheat | cytosol | 55.32 | 40.45 |
| GSMUA_Achr3P13170_001 | Banana | plasma membrane | 45.63 | 39.23 |
| CDX68875 | Canola | plasma membrane | 7.33 | 29.25 |
| CDX68876 | Canola | cytosol | 9.22 | 29.1 |
| CDX68874 | Canola | plasma membrane | 11.94 | 28.86 |
| CDY05287 | Canola | cytosol | 25.3 | 25.6 |
| CDX75270 | Canola | cytosol | 24.35 | 24.38 |
| CDX68877 | Canola | cytosol | 22.93 | 24.34 |
| CDY24673 | Canola | cytosol | 24.82 | 22.27 |
| CDY05286 | Canola | cytosol | 24.82 | 22.06 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 25.3 | 21.9 |
| CDX74093 | Canola | cytosol | 25.41 | 21.72 |
| CDY70269 | Canola | plastid | 17.49 | 21.02 |
| CDY08527 | Canola | plasma membrane | 7.09 | 17.96 |
| CDY24672 | Canola | extracellular | 2.72 | 17.04 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078JD15 |
| UniProt:A0A078JD15 | EnsemblPlants:CDY62724 | ProteinID:CDY62724 | ProteinID:CDY62724.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00037531001 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EF4665 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaC03g77230DBnaC03g77230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD15]
Coordinates
chrLK034182:-:24530..27744
Molecular Weight (calculated)
95614.7 Da
IEP (calculated)
7.661
GRAVY (calculated)
0.582
Length
846 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQATAMARY IDDEQEDDED VCRICRTPRD ADNPLQYPSA CRGSIKFVHQ DCLLQWLSYS KAHRCEVYKH HFSFSSLYDE KAPTRLPLKE FVVGIAMKVW
101: RCRVSHASLR LSLMLLACLL TVSFITFWTW RLAFVQSFGE ARRLFLSHMS TVLVLTDCLL GFLVSATIIF ILLKAASLRN FFRHLGRNFL FNELVRIQSP
201: LFRLAMIVFV IVACNMIFVG VVIFVPFTLG RVILHHVAAA DLLKGFVAVP SKLYDDVTTL TVANMFAVFL YLGIIVLIRY FKGQQPLNFD RLYGVAAASI
301: IETIPPLLRQ LLVGIKVGTL VAYYFGVFPL MCGWWLDVCT VSMFGETMSN RVEFLSVSPL ARSLVHWAVG VLYLSKICIC EDLLLKVLRR EALFFLYDPK
401: DDDDVESFQF MIEEPVHKLA RDVLLDAAKY GSLIVLLVFL PVKLAIMMAP SVFPLDISVS DPFTEIPVGI LLFTICTQFI IEHFGLWTTV KSLVRCWFTS
501: VCWALGLTDL LLPRPEDKVG QDNGDGEPGR QNRGPERAMD VLPATVDPNR SLVLAGNVEK SHSGYIFVLR VVLLLLAAWV TLLLFNTALI VVPVSLGRAL
601: FNAIPILPIT HGIKCNDLYG FVIGTYAFWI IISGTMYATE HLKSERTSVL LNQIWRWCGI VFKSSVLLAI WIFIIPVLIG LVLELLVIVP MRVPVDETPV
701: FLLYQDWALG FIFLKIWTTL FERVEEDGFS RLQGLWVLKE IVSPILMKLL TALCVPYVLA KGVFPMLGCP LVVNSAVYRF AWIGCLSASF FFSCAKRCHV
801: WFINLHNSIR DDRYLVGRRL LNFEEAALAK RKSSASEDDG EGDGDT
101: RCRVSHASLR LSLMLLACLL TVSFITFWTW RLAFVQSFGE ARRLFLSHMS TVLVLTDCLL GFLVSATIIF ILLKAASLRN FFRHLGRNFL FNELVRIQSP
201: LFRLAMIVFV IVACNMIFVG VVIFVPFTLG RVILHHVAAA DLLKGFVAVP SKLYDDVTTL TVANMFAVFL YLGIIVLIRY FKGQQPLNFD RLYGVAAASI
301: IETIPPLLRQ LLVGIKVGTL VAYYFGVFPL MCGWWLDVCT VSMFGETMSN RVEFLSVSPL ARSLVHWAVG VLYLSKICIC EDLLLKVLRR EALFFLYDPK
401: DDDDVESFQF MIEEPVHKLA RDVLLDAAKY GSLIVLLVFL PVKLAIMMAP SVFPLDISVS DPFTEIPVGI LLFTICTQFI IEHFGLWTTV KSLVRCWFTS
501: VCWALGLTDL LLPRPEDKVG QDNGDGEPGR QNRGPERAMD VLPATVDPNR SLVLAGNVEK SHSGYIFVLR VVLLLLAAWV TLLLFNTALI VVPVSLGRAL
601: FNAIPILPIT HGIKCNDLYG FVIGTYAFWI IISGTMYATE HLKSERTSVL LNQIWRWCGI VFKSSVLLAI WIFIIPVLIG LVLELLVIVP MRVPVDETPV
701: FLLYQDWALG FIFLKIWTTL FERVEEDGFS RLQGLWVLKE IVSPILMKLL TALCVPYVLA KGVFPMLGCP LVVNSAVYRF AWIGCLSASF FFSCAKRCHV
801: WFINLHNSIR DDRYLVGRRL LNFEEAALAK RKSSASEDDG EGDGDT
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.