Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034602.1-P | Field mustard | plasma membrane | 84.84 | 85.46 |
| CDY62724 | Canola | cytosol | 85.2 | 84.4 |
| CDY51866 | Canola | cytosol | 67.78 | 66.05 |
| CDY49274 | Canola | cytosol | 56.32 | 59.52 |
| CDX69024 | Canola | cytosol, plastid | 69.21 | 52.35 |
| CDX75396 | Canola | cytosol, plastid | 69.21 | 52.25 |
| VIT_03s0063g00080.t01 | Wine grape | plasma membrane | 61.69 | 46.58 |
| PGSC0003DMT400066581 | Potato | plasma membrane, plastid | 61.58 | 46.36 |
| KRH50333 | Soybean | mitochondrion | 62.17 | 46.35 |
| Solyc01g107880.2.1 | Tomato | plasma membrane, plastid | 61.34 | 46.22 |
| KRH70672 | Soybean | plasma membrane, plastid | 61.93 | 46.17 |
| KXG20452 | Sorghum | cytosol | 55.13 | 42.54 |
| Os06t0639100-02 | Rice | cytosol, peroxisome, plasma membrane | 55.13 | 42.46 |
| Zm00001d036765_P003 | Maize | cytosol | 54.18 | 41.84 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 54.65 | 41.67 |
| TraesCS7A01G524600.2 | Wheat | cytosol | 54.53 | 41.58 |
| Zm00001d046624_P005 | Maize | cytosol | 54.53 | 41.51 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 54.42 | 39.83 |
| GSMUA_Achr3P13170_001 | Banana | plasma membrane | 46.54 | 39.63 |
| TraesCS7D01G513500.2 | Wheat | cytosol | 54.42 | 39.41 |
| CDX68875 | Canola | plasma membrane | 7.76 | 30.66 |
| CDX68874 | Canola | plasma membrane | 11.58 | 27.71 |
| CDX68876 | Canola | cytosol | 8.35 | 26.12 |
| CDY05287 | Canola | cytosol | 24.82 | 24.88 |
| CDX75270 | Canola | cytosol | 24.7 | 24.5 |
| CDX68877 | Canola | cytosol | 23.03 | 24.22 |
| CDY24673 | Canola | cytosol | 24.94 | 22.16 |
| CDY05286 | Canola | cytosol | 24.7 | 21.74 |
| CDX74093 | Canola | cytosol | 25.42 | 21.52 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 24.58 | 21.09 |
| CDY70269 | Canola | plastid | 17.3 | 20.6 |
| CDY08527 | Canola | plasma membrane | 7.16 | 17.96 |
| CDY24672 | Canola | extracellular | 2.63 | 16.3 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078IPS9 |
| UniProt:A0A078IPS9 | EnsemblPlants:CDY51956 | ProteinID:CDY51956 | ProteinID:CDY51956.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00004545001 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EEE2BA | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
BnaA08g11620DBnaA08g11620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPS9]
Coordinates
chrLK033041:+:74726..77937
Molecular Weight (calculated)
95068.2 Da
IEP (calculated)
7.961
GRAVY (calculated)
0.611
Length
838 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQATAMARY IDNEQEDDED VCRICRTPGD ADNPLQYPCA CRGSIKFVHQ DCLLQWLNYS KAHQCEMLLR FLKRRSLVQF VVGIAMKFLR LRVSHASLRL
101: SLVLLACLLT VSFITFWTWR LAFVKSFGEA RRLFLSHMST VLVLTDCLLG FLLSATIIFI LRKAASLRNF FRNLGRNFLF NELVRIQSPL FRLAKIVFAI
201: VACNMIFLGV IIFVPFTLGR VIILHHVASA DLLKGFVAGP SKLYDDVTTL TVGYMFVVFL YLGIIALIRY FKGQQLLNFD RVYGVAASIV ETIPPLLRQL
301: LVGIKLGAKV ACYFGVFPLM CGWWLDVCTV SMFGETMSKR VEFLSVSPLA SSLVHWAVGV LYVLKICICE EELLLKVLRR EALFFLYDPE DDDDDDDEPF
401: QFLIEETVHK FARDFLLDSA KYGSLIFLLV FLLVKLAIMM APSVFPLDIS VSDPFTEIPA GLLLFTICTQ FIIEHFRLWG TVKSLVRCWF TSVCLALGLT
501: DLLLPRPEDK VGQDNGDGEH ERAMDVLPAT VDPNRSFVLA RNVEQSHSGY IFVLRVVLLL LAAWVTLLLF NTALIVVSVS LGRALFNAIP TLPITHGIKC
601: NDLYAFVIGT YAFWTTISGT MYAIEHLKSE RTSVLLNQIW RWCGIVFKSS VLLAIWIFII PVLIGLVIEL LVIVPMRVPV DETPVFLLYQ DWALGFIFLK
701: IWTTLIILLD DSWKAKFERV EEDGFSRFQG LWVLKEIVSP ILMKLLTALC VPYVLAKGVF PMLGYPLVVN SAVYRFAWIG CLSASLFFSC AKRCHVWFIN
801: LHNSIRDDRY LVGRRLLNFE EAALAKRKSS ASEHGEGT
101: SLVLLACLLT VSFITFWTWR LAFVKSFGEA RRLFLSHMST VLVLTDCLLG FLLSATIIFI LRKAASLRNF FRNLGRNFLF NELVRIQSPL FRLAKIVFAI
201: VACNMIFLGV IIFVPFTLGR VIILHHVASA DLLKGFVAGP SKLYDDVTTL TVGYMFVVFL YLGIIALIRY FKGQQLLNFD RVYGVAASIV ETIPPLLRQL
301: LVGIKLGAKV ACYFGVFPLM CGWWLDVCTV SMFGETMSKR VEFLSVSPLA SSLVHWAVGV LYVLKICICE EELLLKVLRR EALFFLYDPE DDDDDDDEPF
401: QFLIEETVHK FARDFLLDSA KYGSLIFLLV FLLVKLAIMM APSVFPLDIS VSDPFTEIPA GLLLFTICTQ FIIEHFRLWG TVKSLVRCWF TSVCLALGLT
501: DLLLPRPEDK VGQDNGDGEH ERAMDVLPAT VDPNRSFVLA RNVEQSHSGY IFVLRVVLLL LAAWVTLLLF NTALIVVSVS LGRALFNAIP TLPITHGIKC
601: NDLYAFVIGT YAFWTTISGT MYAIEHLKSE RTSVLLNQIW RWCGIVFKSS VLLAIWIFII PVLIGLVIEL LVIVPMRVPV DETPVFLLYQ DWALGFIFLK
701: IWTTLIILLD DSWKAKFERV EEDGFSRFQG LWVLKEIVSP ILMKLLTALC VPYVLAKGVF PMLGYPLVVN SAVYRFAWIG CLSASLFFSC AKRCHVWFIN
801: LHNSIRDDRY LVGRRLLNFE EAALAKRKSS ASEHGEGT
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.