Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68877 | Canola | cytosol | 80.95 | 85.82 |
| Bra011370.1-P | Field mustard | cytosol | 47.22 | 68.91 |
| AT4G32670.1 | Thale cress | cytosol | 58.34 | 57.33 |
| CDX68874 | Canola | plasma membrane | 17.16 | 41.43 |
| CDY05287 | Canola | cytosol | 40.83 | 41.27 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 43.31 | 37.46 |
| CDY05286 | Canola | cytosol | 42.01 | 37.29 |
| CDY24673 | Canola | cytosol | 41.42 | 37.12 |
| CDX74093 | Canola | cytosol | 41.78 | 35.66 |
| CDX68875 | Canola | plasma membrane | 8.64 | 34.43 |
| CDY70269 | Canola | plastid | 26.04 | 31.25 |
| CDY08527 | Canola | plasma membrane | 11.24 | 28.44 |
| CDX68876 | Canola | cytosol | 8.99 | 28.36 |
| Solyc01g020190.2.1 | Tomato | plastid | 3.79 | 25.6 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 3.31 | 24.78 |
| CDY51956 | Canola | cytosol | 24.5 | 24.7 |
| CDY62724 | Canola | cytosol | 24.38 | 24.35 |
| CDY49274 | Canola | cytosol | 22.72 | 24.21 |
| CDY51866 | Canola | cytosol | 24.02 | 23.6 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 19.53 | 23.44 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 19.41 | 23.23 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 21.54 | 23.13 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 19.41 | 23.1 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 20.95 | 22.35 |
| CDX69024 | Canola | cytosol, plastid | 27.81 | 21.21 |
| CDX75396 | Canola | cytosol, plastid | 27.81 | 21.17 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 16.8 | 20.79 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 23.67 | 20.37 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 15.86 | 20.21 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 21.54 | 20.16 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 21.42 | 20.07 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 19.29 | 19.98 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 21.3 | 19.91 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 17.75 | 19.84 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 15.5 | 19.82 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 20.95 | 18.95 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 17.16 | 18.73 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 17.4 | 18.17 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 15.86 | 17.29 |
| Os08t0100400-01 | Rice | cytosol | 12.43 | 17.21 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 8.17 | 16.05 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 8.17 | 16.05 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 6.86 | 15.98 |
| CDY24672 | Canola | extracellular | 2.13 | 13.33 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | GO:A0A078CEG1 |
| EnsemblPlants:CDX75270 | ProteinID:CDX75270 | ProteinID:CDX75270.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| EnsemblPlantsGene:GSBRNA2T00121138001 | InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 |
| SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0004EEED3A | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g04320D
Coordinates
chrLK031804:-:421248..424471
Molecular Weight (calculated)
97947.4 Da
IEP (calculated)
8.427
GRAVY (calculated)
0.523
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: METENKEAVP TEAKDMKNED VDICRICQSP EEPNNPLRHP CACRGSLKYV HTDCIFLWIN RRRSKHCEIC KRSYSIVPVY SDNAPEKLPC QELLMSLLLR
101: AFRFMTLILP WLLAIAFHSH CMFLLLADME TEFHESKRVF KLSCFFLGLL YTVEIVTEIT FIVVLRVVYE ELVRTEHELL RTVHLIANGL RHKGVTRVLI
201: VLWKYMRILC DWWHDQLLQL PFFHDMFMRG PLALAFVPRN TQLHEFGAIR RFLFFLDDNT LAVLAINIFW SFLDYMLPYL IGQAVFVLLR CFPPHGWVLE
301: NISEITVGHI VLLSVWVAYL KSVFTLIRNP TRTRWFSLSV KDALILCFKM ILLPWMLGCW IDFCTFPLTG ATVSQRLEVV SDYPLMAAKN WCIGIGYLLV
401: ALSCMKLIQE IVQKRAFWYL LDVTGPNYKI TKLHLRSLLF AFAFHGAVVV IVFHFPIKTI TLINRSFFPL KFGVYKDEFM LGLLAAYICC PRRLANTVKQ
501: SIKPVVHKWV VAVSSCLRLS DFLLGVPQRR DGVNHNVRLA FGIAEGCMVS FYGSQRDTTC EEDTHDQRDE RFMLRIGMLL FLAALSMFLV STTFMALPVL
601: VGRAFFQSIS FYMLSFGLEH DDICAFWIGL CIIRKIYKIT CFVYDHIVTR RVDLLLKHAM KCMQNVLLFS IWIFVVPGLL GLLINLMIII PSQVPLDESP
701: VYNFLHDWLI GVYVLHICIA LTMFTSVTCF ATVAWREKLQ RIRSVGINHL PFTWLIRDVI GSAINTLLTA LCVPYVLVNS LLPVLGFSRE ANLTVQRFVW
801: PVLLALIVIW FSAKLVRNLI IYIHQVEFDN RYKVGERLVD FIEDL
101: AFRFMTLILP WLLAIAFHSH CMFLLLADME TEFHESKRVF KLSCFFLGLL YTVEIVTEIT FIVVLRVVYE ELVRTEHELL RTVHLIANGL RHKGVTRVLI
201: VLWKYMRILC DWWHDQLLQL PFFHDMFMRG PLALAFVPRN TQLHEFGAIR RFLFFLDDNT LAVLAINIFW SFLDYMLPYL IGQAVFVLLR CFPPHGWVLE
301: NISEITVGHI VLLSVWVAYL KSVFTLIRNP TRTRWFSLSV KDALILCFKM ILLPWMLGCW IDFCTFPLTG ATVSQRLEVV SDYPLMAAKN WCIGIGYLLV
401: ALSCMKLIQE IVQKRAFWYL LDVTGPNYKI TKLHLRSLLF AFAFHGAVVV IVFHFPIKTI TLINRSFFPL KFGVYKDEFM LGLLAAYICC PRRLANTVKQ
501: SIKPVVHKWV VAVSSCLRLS DFLLGVPQRR DGVNHNVRLA FGIAEGCMVS FYGSQRDTTC EEDTHDQRDE RFMLRIGMLL FLAALSMFLV STTFMALPVL
601: VGRAFFQSIS FYMLSFGLEH DDICAFWIGL CIIRKIYKIT CFVYDHIVTR RVDLLLKHAM KCMQNVLLFS IWIFVVPGLL GLLINLMIII PSQVPLDESP
701: VYNFLHDWLI GVYVLHICIA LTMFTSVTCF ATVAWREKLQ RIRSVGINHL PFTWLIRDVI GSAINTLLTA LCVPYVLVNS LLPVLGFSRE ANLTVQRFVW
801: PVLLALIVIW FSAKLVRNLI IYIHQVEFDN RYKVGERLVD FIEDL
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.