Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G330800.1 | Wheat | cytosol | 93.04 | 92.78 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 90.62 | 89.86 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 47.44 | 42.44 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 48.01 | 41.78 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 39.06 | 41.48 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 52.7 | 41.04 |
| Os08t0100400-01 | Rice | cytosol | 29.26 | 33.77 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 20.03 | 32.79 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 5.26 | 32.74 |
| Solyc01g020190.2.1 | Tomato | plastid | 5.26 | 29.6 |
| Bra029598.1-P | Field mustard | cytosol | 9.09 | 26.02 |
| Bra011370.1-P | Field mustard | cytosol | 19.46 | 23.66 |
| CDX68876 | Canola | cytosol | 8.81 | 23.13 |
| AT4G32670.1 | Thale cress | cytosol | 25.14 | 20.58 |
| CDX68874 | Canola | plasma membrane | 10.09 | 20.29 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 31.11 | 19.93 |
| CDX75270 | Canola | cytosol | 23.44 | 19.53 |
| Bra001210.1-P | Field mustard | cytosol | 25.28 | 19.22 |
| CDY05287 | Canola | cytosol | 22.44 | 18.9 |
| CDX68875 | Canola | plasma membrane | 5.68 | 18.87 |
| CDX68877 | Canola | cytosol | 21.31 | 18.82 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 25.85 | 18.53 |
| CDX74093 | Canola | cytosol | 25.0 | 17.78 |
| Bra029597.1-P | Field mustard | cytosol | 23.72 | 17.69 |
| CDY24673 | Canola | cytosol | 23.01 | 17.18 |
| CDY05286 | Canola | cytosol | 23.01 | 17.02 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 20.74 | 16.53 |
| CDY24672 | Canola | extracellular | 2.98 | 15.56 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 20.31 | 14.64 |
| CDY70269 | Canola | plastid | 13.07 | 13.07 |
| CDY08527 | Canola | plasma membrane | 4.69 | 9.88 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G342100.2 | EnsemblPlantsGene:TraesCS1B01G342100 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011016 | InterPro:IPR013083 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR13145 | PFAM:PF12906 |
| PFscan:PS51292 | SEG:seg | SMART:SM00744 | SUPFAM:SSF57850 | TIGR:cd16702 | TMHMM:TMhelix |
| MapMan:19.2.1.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:570270417..570274633
Molecular Weight (calculated)
77970.4 Da
IEP (calculated)
8.933
GRAVY (calculated)
0.531
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGASPPET ALPAADGPGD EDGEEEAQCR ICRLPAEAGR PLRHPCACRG SIRFVHDDCQ LRWLATRQRP RCELCNNDIS IRPVYAADAP VRLPVSEFMA
101: GFSHKLMDLL LLLICLVPAL VMYLITLGAW LFALARSFAQ VHYLLSLRPS VASIVAQTAV FILRLPGIIL RGVVGSIPSV ASIVAQSAVF ILRLPGIFLR
201: GVVRSIPAAN FCLNLLSAKI LHPVFFGWAL DICTSEMFGA TMSQRFKLML ASSFASTVLH WYFGCMFWHL GLRFFRLIDK VLRPGIAIPF VHYEAHEPFY
301: KFYLKKLHIL FVGIISMVLV IVVPIQIGGL LVPELFPFHI TYFNCGAKGI SFWQVPRNYV DSVSHALLLT FLIDNTKTLV YLEWLVKKVT RYSFVTTGHA
401: LGLSDSLSIW PVGASGHDDI GSSVAPEDQY DRISEAKDGR RSVAVATILS LMLAWLTIVI FNLAVLIFPI SIGHAITRLP LAGGLKSDDM LALAIGFGTI
501: STVIAASRDS FAYMTSGRTH LLVLNRYLVV FLWLVIAPFL TGLLVDLSLI SPFTGLDDDV PVVGLSYYWS LGCLSLKIWG KQARRTRARC LRAYFIDERW
601: GPKLNQAKAD WDSGITPMWW FLQDVCVPIV TKLIAALGVP YVLAKGVFPR FGYSIAMNSS VYRFVWLGSL GFYLAKALCA KLHDSIRDAR YVVGQRLEDV
701: ADGS
101: GFSHKLMDLL LLLICLVPAL VMYLITLGAW LFALARSFAQ VHYLLSLRPS VASIVAQTAV FILRLPGIIL RGVVGSIPSV ASIVAQSAVF ILRLPGIFLR
201: GVVRSIPAAN FCLNLLSAKI LHPVFFGWAL DICTSEMFGA TMSQRFKLML ASSFASTVLH WYFGCMFWHL GLRFFRLIDK VLRPGIAIPF VHYEAHEPFY
301: KFYLKKLHIL FVGIISMVLV IVVPIQIGGL LVPELFPFHI TYFNCGAKGI SFWQVPRNYV DSVSHALLLT FLIDNTKTLV YLEWLVKKVT RYSFVTTGHA
401: LGLSDSLSIW PVGASGHDDI GSSVAPEDQY DRISEAKDGR RSVAVATILS LMLAWLTIVI FNLAVLIFPI SIGHAITRLP LAGGLKSDDM LALAIGFGTI
501: STVIAASRDS FAYMTSGRTH LLVLNRYLVV FLWLVIAPFL TGLLVDLSLI SPFTGLDDDV PVVGLSYYWS LGCLSLKIWG KQARRTRARC LRAYFIDERW
601: GPKLNQAKAD WDSGITPMWW FLQDVCVPIV TKLIAALGVP YVLAKGVFPR FGYSIAMNSS VYRFVWLGSL GFYLAKALCA KLHDSIRDAR YVVGQRLEDV
701: ADGS
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.