Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G348000.2 | Wheat | cytosol | 97.35 | 97.56 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 95.24 | 95.35 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 93.58 | 90.58 |
| Os08t0100400-01 | Rice | cytosol | 41.59 | 61.64 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 41.04 | 52.7 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 24.0 | 50.47 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 36.95 | 50.38 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 43.58 | 50.06 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 42.7 | 47.71 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.54 | 36.28 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.31 | 31.2 |
| TraesCS7B01G442100.1 | Wheat | cytosol | 34.51 | 28.39 |
| CDX68876 | Canola | cytosol | 8.19 | 27.61 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 28.21 | 25.97 |
| CDX68874 | Canola | plasma membrane | 9.51 | 24.57 |
| Bra011370.1-P | Field mustard | cytosol | 15.49 | 24.18 |
| Bra029598.1-P | Field mustard | cytosol | 6.53 | 23.98 |
| CDY05287 | Canola | cytosol | 20.91 | 22.61 |
| AT4G32670.1 | Thale cress | cytosol | 21.46 | 22.56 |
| CDX68875 | Canola | plasma membrane | 5.09 | 21.7 |
| CDX75270 | Canola | cytosol | 19.91 | 21.3 |
| CDX68877 | Canola | cytosol | 18.69 | 21.2 |
| Bra001210.1-P | Field mustard | cytosol | 21.24 | 20.73 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 19.58 | 20.05 |
| Bra029597.1-P | Field mustard | cytosol | 20.58 | 19.7 |
| CDY24673 | Canola | cytosol | 20.35 | 19.51 |
| CDY05286 | Canola | cytosol | 20.35 | 19.33 |
| CDX74093 | Canola | cytosol | 21.13 | 19.29 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 19.58 | 18.12 |
| CDY70269 | Canola | plastid | 13.38 | 17.19 |
| CDY08527 | Canola | plasma membrane | 6.19 | 16.77 |
| CDY24672 | Canola | extracellular | 2.21 | 14.81 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G252000.1 | EnsemblPlantsGene:TraesCS7B01G252000 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR011016 | InterPro:IPR013083 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR13145 | PFAM:PF12906 |
| PFscan:PS51292 | SEG:seg | SMART:SM00744 | SUPFAM:SSF57850 | TIGR:cd16702 | TMHMM:TMhelix |
| MapMan:19.2.1.1.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:464562242..464568183
Molecular Weight (calculated)
101606.0 Da
IEP (calculated)
9.204
GRAVY (calculated)
0.618
Length
904 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVVPPPET ALSSAADGSD DEDGDQCRIC RFPAEADRPL RRPCACSGSI RFVHDDCLLR WLATSRQSRC EVCSREITIS PLYAPNAPAR LPLSEFMLGL
101: ANKVMGWVIV LLSLVVAVLV WEFIMPVTTL WTWRLALSRS FAQVRHLLSL RLSATSFADG FYRFRFMPSV DTIFACVSIR RAFVRDLGHF RQLNGLARIG
201: ADAVAPFALW VARLETHLQN RFGGLDSLQV LALHTVEASL MVVIIVDIGI AFMFGFVPFT LGRIILWCVS CFNFGNVDDV NSYASTAYII LIGYGFIFSL
301: GVTFAGMHTF HQYSRGERLL IAIFFKILAD GICWLLSPFR WLHRIHVMVR KTFSLCQMFF RGIANLITFA NFSLNVINMV IVFPLLFGWS LDICTSKMFG
401: ATIHQRFKLL WTSSFSSIIL HWLTGCIFLI LRSKLSSLLR PILRPGVSIP FVHLAEEHNV KLSMREPFYI ISFKKLPRLF AGIINVGMVF LVPVQIAGGL
501: APKLFPLDIT YFDPPTKGTS FWQAPRTYAE LLSGIVFLSF LICNTLKYLQ PHKLVEKILR NWFATTGQAL DLLDLLIVQP DGACRHEVSN SVAPNDQYGS
601: TYEAMANRRS VAVRMTLLVV LAWLTVVIFN TVVLIFPISV GRALLLAIPQ LPVAGGFKFN DLFAFAVGFC TISTIIAASR ESFVNMTSGR TCLLASVICK
701: WGITALKSSP LLFIWIVIIP ILIGLLVDFL LISPFKFLVD FLVMSPFIVP ADDIPVLDLF SIWFLGLLLL KFWTNLAHWT RDAPFLAHFI DGRWDWKLTR
801: AKDDGFAGLR TKWVFQDILM PVTMKLVIVL GVPYVLAKGL FPRFGYSAAV NSAVYHFAWL GSLALCGLCY LAKVFWGALV KLHDSIRDER YIIGQRLQDY
901: TDNS
101: ANKVMGWVIV LLSLVVAVLV WEFIMPVTTL WTWRLALSRS FAQVRHLLSL RLSATSFADG FYRFRFMPSV DTIFACVSIR RAFVRDLGHF RQLNGLARIG
201: ADAVAPFALW VARLETHLQN RFGGLDSLQV LALHTVEASL MVVIIVDIGI AFMFGFVPFT LGRIILWCVS CFNFGNVDDV NSYASTAYII LIGYGFIFSL
301: GVTFAGMHTF HQYSRGERLL IAIFFKILAD GICWLLSPFR WLHRIHVMVR KTFSLCQMFF RGIANLITFA NFSLNVINMV IVFPLLFGWS LDICTSKMFG
401: ATIHQRFKLL WTSSFSSIIL HWLTGCIFLI LRSKLSSLLR PILRPGVSIP FVHLAEEHNV KLSMREPFYI ISFKKLPRLF AGIINVGMVF LVPVQIAGGL
501: APKLFPLDIT YFDPPTKGTS FWQAPRTYAE LLSGIVFLSF LICNTLKYLQ PHKLVEKILR NWFATTGQAL DLLDLLIVQP DGACRHEVSN SVAPNDQYGS
601: TYEAMANRRS VAVRMTLLVV LAWLTVVIFN TVVLIFPISV GRALLLAIPQ LPVAGGFKFN DLFAFAVGFC TISTIIAASR ESFVNMTSGR TCLLASVICK
701: WGITALKSSP LLFIWIVIIP ILIGLLVDFL LISPFKFLVD FLVMSPFIVP ADDIPVLDLF SIWFLGLLLL KFWTNLAHWT RDAPFLAHFI DGRWDWKLTR
801: AKDDGFAGLR TKWVFQDILM PVTMKLVIVL GVPYVLAKGL FPRFGYSAAV NSAVYHFAWL GSLALCGLCY LAKVFWGALV KLHDSIRDER YIIGQRLQDY
901: TDNS
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.