Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY24673 Canola cytosol 97.03 97.14
Bra001210.1-P Field mustard cytosol 53.5 54.54
Bra029598.1-P Field mustard cytosol 10.49 40.24
Bra011369.1-P Field mustard cytosol, peroxisome, plasma membrane 37.29 39.86
Bra011370.1-P Field mustard cytosol 23.31 38.0
GSMUA_Achr1P26090_001 Banana cytosol, plastid 3.6 30.09
Solyc01g020190.2.1 Tomato plastid 3.71 28.0
Bra017626.1-P Field mustard cytosol 22.14 24.73
TraesCS1A01G328300.1 Wheat cytosol 17.9 23.8
TraesCS1B01G342100.2 Wheat cytosol 17.69 23.72
TraesCS1D01G330800.1 Wheat cytosol 17.58 23.51
HORVU5Hr1G098410.4 Barley plasma membrane 18.75 22.35
Bra034602.1-P Field mustard plasma membrane 19.07 21.63
TraesCS1B01G465300.1 Wheat cytosol 17.9 21.47
Bra011487.1-P Field mustard cytosol, plastid 24.89 21.04
TraesCS7D01G348000.2 Wheat cytosol 20.02 20.95
TraesCS7A01G340400.1 Wheat cytosol 19.81 20.71
TraesCS7B01G252000.1 Wheat cytosol 19.7 20.58
TraesCS1D01G439900.1 Wheat cytosol 16.42 20.5
GSMUA_Achr1P26100_001 Banana plasma membrane 21.19 20.37
TraesCS1A01G430800.1 Wheat cytosol 14.19 20.27
TraesCS1B01G465500.1 Wheat cytosol 14.19 20.21
TraesCS5D01G415200.1 Wheat plasma membrane 14.62 20.2
HORVU1Hr1G093800.1 Barley cytosol 16.42 20.03
TraesCS1D01G440100.2 Wheat cytosol, nucleus, plasma membrane 17.27 19.98
HORVU7Hr1G083770.3 Barley cytosol 19.7 19.91
TraesCS1B01G465700.1 Wheat cytosol 16.95 19.78
HORVU1Hr1G093830.1 Barley plasma membrane 15.25 18.58
Os08t0100400-01 Rice cytosol 11.65 18.03
TraesCS1B01G465200.1 Wheat plasma membrane 7.1 15.58
TraesCS1A01G430500.1 Wheat plasma membrane 6.89 15.12
TraesCS5A01G405100.1 Wheat plasma membrane 5.72 14.88
Protein Annotations
MapMan:19.2.1.1.1.1Gene3D:3.30.40.10EnsemblPlantsGene:Bra029597EnsemblPlants:Bra029597.1EnsemblPlants:Bra029597.1-PGO:GO:0003674
GO:GO:0005488GO:GO:0005575GO:GO:0008270GO:GO:0016020GO:GO:0016021GO:GO:0046872
InterPro:IPR011016InterPro:IPR013083UniProt:M4ELC9PFAM:PF12906PFscan:PS51292PANTHER:PTHR13145
SMART:SM00744SUPFAM:SSF57850TMHMM:TMhelixUniParc:UPI00025480ABInterPro:Znf_RING-CHInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
AT4G32670 (E=1e-125) | zinc ion binding
Coordinates
chrA05:+:23076402..23079880
Molecular Weight (calculated)
107820.0 Da
IEP (calculated)
8.040
GRAVY (calculated)
0.622
Length
944 amino acids
Sequence
(BLAST)
001: MDVSPEAGSY DEVFSAEDED QCRICRSPEE PGNPLRYPCL CRGSIKFVHQ DCLRTWLIRR GNNKCEVCGR SYSFVPVYSE NAPERLSCDE FLLGVLSRAG
101: RYLKMIVPWI VLILLNCYFV SLHPWGQVAA AEFQNDFGMS RKFACFSTGL LYIVFSVCLM TVIALVKLEV GDVNVRRFIG NGGGLQFLLK YMKILFDWYC
201: HKLIHFLGEP PRLIFLPPEA PLHEFGVIRG VLFFLDDDSF AILAISVYVA ILVVLLPVWI GRIGGSYLSV NSTVVLGYMI MLSVWFAYVG FLFALHQNLF
301: PVIVRWLSLG VHFVAVKLPC LLWVFSVKSC KRLQSLVSFG IRQASLPAIF HWFSLGFHFI TVRLPSFLWV SSEMVCKSFQ SLVRLRIISI HREATTPPAI
401: FQWFSIGFHF ITVTLPRFLW VSSAVACVIL SVLKEAFVLC FKIGVLPWII GCWLGICTSP LFGTIFSQSF ETVSHFPCMM FLRWSSGIVC LLVAQSCMYR
501: IQEIVHKRAI WYLLDVTDPD YKITKMNFGH TFFALASHGV LLVILFHLPI RAITLISPSF FPLELWVSDE EVSAAAHSIY FHLLSSSPKW LIGLVKPAME
601: LMVQNWIITV SSWLDLSDYL LVADQNVRPR MQPRRRWLLF CSVAEGSLVS LHGSKNSEDD TKDQRDNRFL LRIALMLMLA ALSTFVVSTA FMALPILLGR
701: GLLESLSFIM LRIGLKRDDL LAFWIGYSII GQTYTITCFV YDEIQKGRFD LLLKDVFMWI RNGLLFSIWI SVIPGLLGLL IELMIIIPLR VPLDESPVHF
801: LIQDWLIGVF VLHTWVFLTM LTPINWFATE AWLRKLERIR NVGLTRVPST WLLQDVIGSI INTLLTTLTI PYLLVKFLFP LLGVSESVTS ATERLIWPAL
901: LALLAGWIIA RITHDFIIYV HQLVFNERYL VGEILNNVTE EERT
Best Arabidopsis Sequence Match ( AT4G32670.1 )
(BLAST)
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.