Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G348000.2 | Wheat | cytosol | 91.11 | 94.35 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 90.58 | 93.58 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 90.47 | 93.58 |
| Os08t0100400-01 | Rice | cytosol | 39.83 | 60.98 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 44.75 | 52.78 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 39.51 | 47.67 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 38.87 | 46.84 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.18 | 34.51 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.07 | 30.4 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 33.62 | 27.42 |
| CDX68876 | Canola | cytosol | 7.6 | 26.49 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 27.62 | 26.27 |
| CDX68874 | Canola | plasma membrane | 9.31 | 24.86 |
| Bra011370.1-P | Field mustard | cytosol | 14.78 | 23.83 |
| AT4G32670.1 | Thale cress | cytosol | 20.56 | 22.33 |
| CDY05287 | Canola | cytosol | 19.49 | 21.77 |
| Bra029598.1-P | Field mustard | cytosol | 5.67 | 21.54 |
| CDX75270 | Canola | cytosol | 18.95 | 20.95 |
| CDX68877 | Canola | cytosol | 17.77 | 20.83 |
| CDX68875 | Canola | plasma membrane | 4.71 | 20.75 |
| Bra001210.1-P | Field mustard | cytosol | 20.13 | 20.3 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 19.06 | 20.16 |
| Bra029597.1-P | Field mustard | cytosol | 19.91 | 19.7 |
| CDY24673 | Canola | cytosol | 19.81 | 19.62 |
| CDY05286 | Canola | cytosol | 19.7 | 19.33 |
| CDX74093 | Canola | cytosol | 20.02 | 18.89 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 19.06 | 18.22 |
| CDY70269 | Canola | plastid | 12.53 | 16.62 |
| CDY08527 | Canola | plasma membrane | 5.67 | 15.87 |
| CDY24672 | Canola | extracellular | 1.93 | 13.33 |
Protein Annotations
| MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A287X4Z4 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:HORVU7Hr1G083770 | EnsemblPlants:HORVU7Hr1G083770.3 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000B4805D9 | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:505007608..505013476
Molecular Weight (calculated)
104308.0 Da
IEP (calculated)
9.358
GRAVY (calculated)
0.546
Length
934 amino acids
Sequence
(BLAST)
(BLAST)
001: EDAIERGAHG RCLLSRGGGG RDQRPREASP RMAAVPPPET ALSSVADGSD DEDGDQCXXX XFPAEADRPL RRPCACSGSI RFVHDDCLLR WLATSRQSRC
101: EVCKREITIS PLYAPNAPAR LPLSEFMLGL ANKVMGWVIV LLSLVVAVLV WEFIMPITTL WTWRLALSRS FAQVRHLLSL RLSATSFADG FYRFRFMPSV
201: DTIFACVSIR RAFVRDLVHF RQLNGLARIG ADAVAPFALW VARLETNLQN RFGGLDSLQV LALHTVEASL MVVIVDIGIA FMFGFVPFTL GRIILWCVSC
301: FNFGNVDDVN SNASTAYILL IGYGFIFSLG VTFAGMHTFK QYSRGERLLI AIFFKILADG TCWLLSPFRW LHRIHAMVRK TFSLCQMFFR GIGKLITFAN
401: FSLNVINMVV VFPLLFGWSL DICTSKMFGA TIHQRFKLMW ASSFSSIALH WLTGCIFLML RSKLSSLLRP ILRRGVSIPF FYLAEEHNVK LCLREPFYII
501: SFKKLPRLFA GIINVGMVFL VPVQIASGLA PKLFPLDITY FDPPTKGTSF WQAPRTYAEL LSGIVLLRFL ICNTLKYLQP SKLMEKILQN WFATTGQALD
601: LLDLLTVQPA DGACGHEVSN SVAPNDQYGS TYEAMANRRS VAVRMTLLVV LAWLTVVIFN TVMLIFPISI GRALLLAIPQ LPVVGGLKFN DLFAFAVGFC
701: TISTIIATSR DSFVYMTSGR TCLLASAICK WGITAVKSSP LLFIWIVIIP ILIGLLVDFL LISPFKFLVD FLVMSPFIVP ADDIPVLDFF SIWFLGLILL
801: KFWTILAHWT RGVPFLAHFI DGRWDWKLTR AKDDGFAGLR AKWVLQDILM PITMKLVIVL CVPYVLAKGL FPRFGYSAAV NSAVYHFAWL GSLASCGLCY
901: LAKVFWGALV KLHDSIRDER YIIGQRLQDY TDNS
101: EVCKREITIS PLYAPNAPAR LPLSEFMLGL ANKVMGWVIV LLSLVVAVLV WEFIMPITTL WTWRLALSRS FAQVRHLLSL RLSATSFADG FYRFRFMPSV
201: DTIFACVSIR RAFVRDLVHF RQLNGLARIG ADAVAPFALW VARLETNLQN RFGGLDSLQV LALHTVEASL MVVIVDIGIA FMFGFVPFTL GRIILWCVSC
301: FNFGNVDDVN SNASTAYILL IGYGFIFSLG VTFAGMHTFK QYSRGERLLI AIFFKILADG TCWLLSPFRW LHRIHAMVRK TFSLCQMFFR GIGKLITFAN
401: FSLNVINMVV VFPLLFGWSL DICTSKMFGA TIHQRFKLMW ASSFSSIALH WLTGCIFLML RSKLSSLLRP ILRRGVSIPF FYLAEEHNVK LCLREPFYII
501: SFKKLPRLFA GIINVGMVFL VPVQIASGLA PKLFPLDITY FDPPTKGTSF WQAPRTYAEL LSGIVLLRFL ICNTLKYLQP SKLMEKILQN WFATTGQALD
601: LLDLLTVQPA DGACGHEVSN SVAPNDQYGS TYEAMANRRS VAVRMTLLVV LAWLTVVIFN TVMLIFPISI GRALLLAIPQ LPVVGGLKFN DLFAFAVGFC
701: TISTIIATSR DSFVYMTSGR TCLLASAICK WGITAVKSSP LLFIWIVIIP ILIGLLVDFL LISPFKFLVD FLVMSPFIVP ADDIPVLDFF SIWFLGLILL
801: KFWTILAHWT RGVPFLAHFI DGRWDWKLTR AKDDGFAGLR AKWVLQDILM PITMKLVIVL CVPYVLAKGL FPRFGYSAAV NSAVYHFAWL GSLASCGLCY
901: LAKVFWGALV KLHDSIRDER YIIGQRLQDY TDNS
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.