Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G465700.1 | Wheat | cytosol | 79.46 | 76.02 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 75.32 | 71.45 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 43.15 | 42.17 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 47.67 | 39.51 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 39.15 | 39.1 |
| Os08t0100400-01 | Rice | cytosol | 29.07 | 36.89 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.13 | 28.32 |
| Solyc01g020190.2.1 | Tomato | plastid | 3.75 | 23.2 |
| Bra029598.1-P | Field mustard | cytosol | 7.36 | 23.17 |
| CDX68876 | Canola | cytosol | 7.49 | 21.64 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 31.78 | 21.48 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 26.74 | 21.08 |
| Bra011370.1-P | Field mustard | cytosol | 15.76 | 21.07 |
| CDX68874 | Canola | plasma membrane | 8.91 | 19.71 |
| AT4G32670.1 | Thale cress | cytosol | 21.06 | 18.95 |
| CDX68875 | Canola | plasma membrane | 5.04 | 18.4 |
| Bra001210.1-P | Field mustard | cytosol | 21.32 | 17.82 |
| CDY05287 | Canola | cytosol | 18.86 | 17.46 |
| CDX75270 | Canola | cytosol | 18.73 | 17.16 |
| CDX74093 | Canola | cytosol | 21.19 | 16.57 |
| CDY24673 | Canola | cytosol | 20.16 | 16.54 |
| CDY05286 | Canola | cytosol | 20.28 | 16.49 |
| Bra029597.1-P | Field mustard | cytosol | 20.03 | 16.42 |
| CDY24672 | Canola | extracellular | 2.84 | 16.3 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 18.35 | 16.08 |
| CDX68877 | Canola | cytosol | 16.54 | 16.06 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 17.96 | 14.23 |
| CDY70269 | Canola | plastid | 12.79 | 14.06 |
| CDY08527 | Canola | plasma membrane | 5.3 | 12.28 |
Protein Annotations
| MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A287GT12 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:HORVU1Hr1G093800 | EnsemblPlants:HORVU1Hr1G093800.1 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000B487BEF | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chrchr1H:-:554071783..554077004
Molecular Weight (calculated)
85288.6 Da
IEP (calculated)
8.481
GRAVY (calculated)
0.634
Length
774 amino acids
Sequence
(BLAST)
(BLAST)
001: KPPLSASSTA PARMEEEEEQ QCRICRHPAD ADRPLRHPCG CKGSIRFVHD HCQIGWLQTT GQRSCEVCGR QIFTIPIYAA GAPAPAPAPA SLACLALALL
101: YLILTALLAW ALAGLCTWRL ALARSPDQAF RLLSVRLYGP AILAHLAFQA ERAFRATYGA RLRRCQFAAL TVLRFSLSVV RSDMALACIF AFVPFTLGRI
201: ILLCRGEVDS FASTSSILLA GYGFIFSLGG TFAALHTSHE YSRGESIFFG SLFDVFCKRI IKLIIAANAF INLIITAIIC PFLFAWLLDT CTSKMFDVTI
301: SGRVKLLCAS SYVSAAIYWL IGCALLDLGS TFSRLHCTIL GPAVTSRIVH HNVNIHEPFY ESYLKKLPGL FVGIILIVMF IVVPIQIACP LAPEKFPVDI
401: TYFVFPKKGM SCRSASQNYT DLLCGVLLLG FLIGRTHALI WVEWLVKEAM QYTYGHEQAL GLSVSVSFWP SGVCGHYSGS SVAPKDNTTE ATDKRRLATL
501: RTISHVILGW LIVVVFNSVV LILTISAGRA LLFAIPQLPL TVGLKSNDLL ALVVGFGIIS AIIAASRDWC AYMISGRKDL VALNRCVIVF LWFGIVPLLI
601: GLLVDLSLIS PFTGPDDGVP VLDLFYTWFL GWLLLKIWVK WVHWPLSPFL AYLTDESRVP RLTRAKLDWP RGAMMPLPCF FRDIFVPVAT KLLVALGVPY
701: VLAGGVFPSL GYSAAVNSAV HRFAWLGCIS FWVLRALCCL AKLFWAFCVE ELHDSVKDER VVIGQRLEDV ADDG
101: YLILTALLAW ALAGLCTWRL ALARSPDQAF RLLSVRLYGP AILAHLAFQA ERAFRATYGA RLRRCQFAAL TVLRFSLSVV RSDMALACIF AFVPFTLGRI
201: ILLCRGEVDS FASTSSILLA GYGFIFSLGG TFAALHTSHE YSRGESIFFG SLFDVFCKRI IKLIIAANAF INLIITAIIC PFLFAWLLDT CTSKMFDVTI
301: SGRVKLLCAS SYVSAAIYWL IGCALLDLGS TFSRLHCTIL GPAVTSRIVH HNVNIHEPFY ESYLKKLPGL FVGIILIVMF IVVPIQIACP LAPEKFPVDI
401: TYFVFPKKGM SCRSASQNYT DLLCGVLLLG FLIGRTHALI WVEWLVKEAM QYTYGHEQAL GLSVSVSFWP SGVCGHYSGS SVAPKDNTTE ATDKRRLATL
501: RTISHVILGW LIVVVFNSVV LILTISAGRA LLFAIPQLPL TVGLKSNDLL ALVVGFGIIS AIIAASRDWC AYMISGRKDL VALNRCVIVF LWFGIVPLLI
601: GLLVDLSLIS PFTGPDDGVP VLDLFYTWFL GWLLLKIWVK WVHWPLSPFL AYLTDESRVP RLTRAKLDWP RGAMMPLPCF FRDIFVPVAT KLLVALGVPY
701: VLAGGVFPSL GYSAAVNSAV HRFAWLGCIS FWVLRALCCL AKLFWAFCVE ELHDSVKDER VVIGQRLEDV ADDG
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSDRY NFVVRIILLL
0801: LVAWVTLLLF NSALIVVPVS LGRALFSAIP ILPITHGIKC NDLYAFVIGT YAFWTTISGA RYAIEHVKSK RTSVLLNQIW KWCGIVFKSS VLLAIWVFII
0901: PVLIGLLFEL LVIVPMRVPV DESPVFLLYQ DWALGLIFLK IWTRLVMLDH MLPIVDDSWR AKFERVREDG FSRLQGLWVL REIVFPIVMK LLTALCVPYV
1001: LARGVFPMLG YPLVVNSAVY RFAWIGCLSV SLFCFCAKRC HVWFRNLHNS IRDDRYLIGR RLHNFGEAAL ANQNQNQSSE DAGDGVLIGR EGDVDNGLRL
1101: RRAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.