Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 75.51 | 87.55 |
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 38.89 | 84.85 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 48.36 | 49.42 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 52.78 | 44.75 |
| Os08t0100400-01 | Rice | cytosol | 33.59 | 43.61 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 42.17 | 43.15 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 4.8 | 33.63 |
| Solyc01g020190.2.1 | Tomato | plastid | 4.29 | 27.2 |
| Bra029598.1-P | Field mustard | cytosol | 7.95 | 25.61 |
| HORVU7Hr1G116420.2 | Barley | cytosol, mitochondrion, plasma membrane | 33.96 | 23.49 |
| Bra011370.1-P | Field mustard | cytosol | 16.92 | 23.14 |
| CDX68876 | Canola | cytosol | 7.83 | 23.13 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 27.53 | 22.2 |
| AT4G32670.1 | Thale cress | cytosol | 23.99 | 22.09 |
| CDY05287 | Canola | cytosol | 22.6 | 21.41 |
| CDX68875 | Canola | plasma membrane | 5.68 | 21.23 |
| CDX75270 | Canola | cytosol | 22.35 | 20.95 |
| CDX68874 | Canola | plasma membrane | 8.96 | 20.29 |
| Bra001210.1-P | Field mustard | cytosol | 22.6 | 19.33 |
| CDX68877 | Canola | cytosol | 19.07 | 18.95 |
| Bra029597.1-P | Field mustard | cytosol | 22.35 | 18.75 |
| CDY24673 | Canola | cytosol | 22.22 | 18.66 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 20.58 | 18.46 |
| CDX74093 | Canola | cytosol | 22.85 | 18.28 |
| CDY05286 | Canola | cytosol | 21.59 | 17.96 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 20.08 | 16.27 |
| CDY70269 | Canola | plastid | 13.76 | 15.48 |
| CDY24672 | Canola | extracellular | 2.53 | 14.81 |
| CDY08527 | Canola | plasma membrane | 6.19 | 14.67 |
Protein Annotations
| MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A287SGB7 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 | EnsemblPlantsGene:HORVU5Hr1G098410 | EnsemblPlants:HORVU5Hr1G098410.4 |
| InterPro:IPR011016 | InterPro:IPR013083 | PFAM:PF12906 | PFscan:PS51292 | PANTHER:PTHR13145 | SMART:SM00744 |
| SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI000B47A82E | InterPro:Znf_RING-CH | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:+:607266264..607271668
Molecular Weight (calculated)
88886.6 Da
IEP (calculated)
8.345
GRAVY (calculated)
0.547
Length
792 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAAAATAT ATAPPETALP AGDGPGYDDD DDYEEEECRI CRLPAEAGRP LRRPCACRGS IRFVHDDCQL RWRAARQKNR CEVCNRNIST RPLYAADAPV
101: RLHVSELMAG LPRKLMGLLL PLFFAVCVVW EFVIPLTTLW TWRLALATTF AQVHYLLSLR LSVTCIPASI ALWATFLRWV APFAVAPYVR WIERLVTWSE
201: RQEFQSFDAF QVLAILTVEV SLAVVIVDMA LACIFCFVPF SLGRITLWSS CLNFDNVDEV NCYTSTASTL LIGFGLIFTV GASFAVVHTF HLYLRGKRLV
301: TTIFYRRLYG IFFRGIIKLT RVANISLNIL YNGIIYPLFF GCSLDICTSK MFGATMTQRF NFLIASSLAS AALHWLIGRS FLKLRPRLFK LLHKIFGPGV
401: FTPFLSYNFS EPFYKFYLKN FLGLFVDIMF VALVILVPIK IADLLAPEVF PLDITYFDHP AKGTSVWQGL LLNFAELFSA VHHMTYLIGK TVIYLGHVME
501: RVVGYWSITA GQALGDNVPS KDQYDTCDDA KDECRRYAAV QTILRVVLAW LTAVIFYSGM LLFPVSVGRA LLIAIPQLPV AGGLKSNDLF AVAVGFCIIS
601: TIIAALRDLS ACMTSGRTCL LALKRDLLFF IWMVIIPLLI GLLADLLLIS PFVGTDFPAL NFFRTWLLGR FFKLLWINHV DESWEAKFKR ANEDCSGELR
701: AMWWFFQDVC IPVAMKLLVA LAVPYVLAKG VFPRLGYSAS LNSTVYRFSW LGSLGICAFY CLGKVLCVQL HDSIRDDRYA IGRTLEDVGD GS
101: RLHVSELMAG LPRKLMGLLL PLFFAVCVVW EFVIPLTTLW TWRLALATTF AQVHYLLSLR LSVTCIPASI ALWATFLRWV APFAVAPYVR WIERLVTWSE
201: RQEFQSFDAF QVLAILTVEV SLAVVIVDMA LACIFCFVPF SLGRITLWSS CLNFDNVDEV NCYTSTASTL LIGFGLIFTV GASFAVVHTF HLYLRGKRLV
301: TTIFYRRLYG IFFRGIIKLT RVANISLNIL YNGIIYPLFF GCSLDICTSK MFGATMTQRF NFLIASSLAS AALHWLIGRS FLKLRPRLFK LLHKIFGPGV
401: FTPFLSYNFS EPFYKFYLKN FLGLFVDIMF VALVILVPIK IADLLAPEVF PLDITYFDHP AKGTSVWQGL LLNFAELFSA VHHMTYLIGK TVIYLGHVME
501: RVVGYWSITA GQALGDNVPS KDQYDTCDDA KDECRRYAAV QTILRVVLAW LTAVIFYSGM LLFPVSVGRA LLIAIPQLPV AGGLKSNDLF AVAVGFCIIS
601: TIIAALRDLS ACMTSGRTCL LALKRDLLFF IWMVIIPLLI GLLADLLLIS PFVGTDFPAL NFFRTWLLGR FFKLLWINHV DESWEAKFKR ANEDCSGELR
701: AMWWFFQDVC IPVAMKLLVA LAVPYVLAKG VFPRLGYSAS LNSTVYRFSW LGSLGICAFY CLGKVLCVQL HDSIRDDRYA IGRTLEDVGD GS
001: MEISPAEDKL VGSGEAVTTE EVSDINNKAV DICRICQSPE EPDNPLRHPC ACRGSLKYIH SDCLFLWLNR RKRNHCEICK RSYSIVPVYS ENAPERLPWH
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
101: EFLMGLLMRA LRFMNLILPW ILMMPFNAYC FSFRPWGRES EFVNQTVFEL SLRFPGLFYT AQIVSSATEM VVQMETIRVL LRRHPEFLRR MIILENGLKD
201: RDVTGIVLLL ANHLQILCDW WHDQLLQLPF LHIFQRGPLA LAFVPRNTPL HQFGAIRRVF SLLSDNTFAV LAINIYWSFF RVLLPFSIGR VVLVLLRCLP
301: HGWIAENASE MAAGDMVIRS VLLACLGGVF TMSRDTYLTS VRTFLPSVKD TFILSFKLGV LPWLLGCWLH FCTFPILGKT ASHTVEVLSD YPLMADKHWL
401: MGTLYLVSAL SCMELIQKIV QKRALWYLLD VAEPNYKVTK LHLGPILLAF ALHGTMVVIV LHLPIKTISL ISQSFFPLQF GVYEDEFVFG LLVAYMCLVI
501: FGPRWLANLI RPSIRPIVHK WVITISSLLK LSDFLLGEPR KHRANHNMRL RCLVFGIAEG SMVSLHGSQS DTTCEKDTNE QRDKRFMVRI GVMLILASLS
601: MFLVSTTFMA LPILVGRAFF HSISFFMLSF GLKHDDLCAF WIGFCILRGI YIITCFVYDH FITGRTDLLL NHVLMFIRNV LLFSIWISVI PGVLGLLIDL
701: MIIIPSQVPL GESPVYNLLH DWLIGVVVLH IWIFLTMLTR INCFATVAWR EKLQRIRSVT INRLPFTWLI RDVIGSIIVS LLFTLCVPYV VVNSLFPILG
801: FSSAVNLTVQ RFIWPAILAL IPIWFSVKLI RDLILYLHKL EFDNRYKVGE RLVDFTEDLE
Arabidopsis Description
RING/FYVE/PHD zinc finger superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JV39]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.