Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G405100.1 | Wheat | plasma membrane | 31.64 | 53.17 |
| TraesCS1A01G430500.1 | Wheat | plasma membrane | 32.95 | 46.74 |
| TraesCS1B01G465200.1 | Wheat | plasma membrane | 32.3 | 45.81 |
| TraesCS7A01G340400.1 | Wheat | cytosol | 62.46 | 42.19 |
| TraesCS7D01G348000.2 | Wheat | cytosol | 61.8 | 41.8 |
| TraesCS7B01G252000.1 | Wheat | cytosol | 61.64 | 41.59 |
| HORVU7Hr1G083770.3 | Barley | cytosol | 60.98 | 39.83 |
| TraesCS1B01G465500.1 | Wheat | cytosol | 38.03 | 34.99 |
| TraesCS1A01G430800.1 | Wheat | cytosol | 37.87 | 34.95 |
| HORVU5Hr1G098410.4 | Barley | plasma membrane | 43.61 | 33.59 |
| TraesCS1D01G439900.1 | Wheat | cytosol | 40.16 | 32.41 |
| TraesCS1B01G465300.1 | Wheat | cytosol | 41.48 | 32.15 |
| TraesCS5D01G415200.1 | Wheat | plasma membrane | 34.43 | 30.75 |
| HORVU1Hr1G093830.1 | Barley | plasma membrane | 38.52 | 30.32 |
| TraesCS1D01G330800.1 | Wheat | cytosol | 34.92 | 30.17 |
| TraesCS1A01G328300.1 | Wheat | cytosol | 34.59 | 29.72 |
| TraesCS1B01G342100.2 | Wheat | cytosol | 33.77 | 29.26 |
| GSMUA_Achr1P26090_001 | Banana | cytosol, plastid | 5.41 | 29.2 |
| HORVU1Hr1G093800.1 | Barley | cytosol | 36.89 | 29.07 |
| TraesCS1D01G440100.2 | Wheat | cytosol, nucleus, plasma membrane | 38.2 | 28.55 |
| TraesCS1B01G465700.1 | Wheat | cytosol | 37.87 | 28.55 |
| Solyc01g020190.2.1 | Tomato | plastid | 5.74 | 28.0 |
| Bra029598.1-P | Field mustard | cytosol | 10.0 | 24.8 |
| CDX68876 | Canola | cytosol | 9.51 | 21.64 |
| CDX68875 | Canola | plasma membrane | 6.72 | 19.34 |
| Os06t0639100-02 | Rice | cytosol, peroxisome, plasma membrane | 31.97 | 17.92 |
| CDY08527 | Canola | plasma membrane | 9.02 | 16.47 |
| Bra011370.1-P | Field mustard | cytosol | 13.44 | 14.16 |
| GSMUA_Achr1P26100_001 | Banana | plasma membrane | 22.13 | 13.75 |
| CDX68877 | Canola | cytosol | 16.89 | 12.92 |
| CDY05287 | Canola | cytosol | 17.7 | 12.92 |
| Bra001210.1-P | Field mustard | cytosol | 19.51 | 12.85 |
| AT4G32670.1 | Thale cress | cytosol | 17.87 | 12.67 |
| CDX75270 | Canola | cytosol | 17.21 | 12.43 |
| CDX74093 | Canola | cytosol | 19.18 | 11.82 |
| Bra029597.1-P | Field mustard | cytosol | 18.03 | 11.65 |
| CDY05286 | Canola | cytosol | 18.03 | 11.55 |
| CDY24673 | Canola | cytosol | 17.7 | 11.45 |
| CDY70269 | Canola | plastid | 13.11 | 11.36 |
| Bra011369.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 16.23 | 11.21 |
| CDX75269 | Canola | cytosol, peroxisome, plasma membrane | 16.07 | 10.03 |
| CDY24672 | Canola | extracellular | 2.13 | 9.63 |
| CDX68874 | Canola | plasma membrane | 2.79 | 4.86 |
Protein Annotations
| MapMan:19.2.1.1.1.1 | Gene3D:3.30.40.10 | UniProt:A0A0P0XBF7 | ProteinID:BAT03392.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0008270 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0046872 |
| InterPro:IPR011016 | InterPro:IPR013083 | EnsemblPlantsGene:Os08g0100400 | EnsemblPlants:Os08t0100400-01 | PFAM:PF12906 | PFscan:PS51292 |
| PANTHER:PTHR13145 | SMART:SM00744 | SUPFAM:SSF57850 | TMHMM:TMhelix | UniParc:UPI0001C7BD10 | InterPro:Znf_RING-CH |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Zinc finger, RING-CH-type domain containing protein. (Os08t0100400-01);Hypothetical conserved gene. (Os08t0100400-02)
Coordinates
chr8:-:26273..33514
Molecular Weight (calculated)
68500.6 Da
IEP (calculated)
8.307
GRAVY (calculated)
0.471
Length
610 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPPPPLGS ETAISPAYGE EEEEEEEEQC RICRVPAEAG RPLRHPCACR GSIRFVHDDC LLRWLATRRT SHCEVCKRLI STCPLYAANA PARLPLSEFM
101: LGLANKLMGW FFLLLSLLAA MYIWEFVMPF TTLWIWRLAL ARSFARVRHL LSLRIFAHAH GHGAPLYGLM PSPDAVFACV SIRRAFLRDL PHFRDLNPLA
201: RFAAHALAPF ALWIARLETR LDRRFGGLDS LQVIALHTVE ASLMVVLLDV MLACVFGFIP FSLGRIILFC TSCFSFGNMD RVHSYTSTSS ILLVGYGFIF
301: SLGVLFTGFH TFDQYSRGEH LTIAVFFKVL TNGMYRLFSP LRRLPGIHVM VQMALSFLRL FFRGIINLVT VANISVNLIN VIAIWPLFFG WSVDICASQL
401: FGETIYQKLE LLFASSFAST ALHWLIGCIY LMLLSIFSSP LCLVLGPGVT IPFVHFSGEE SLIQLFREPF YKFSLKLLPG LFVSAVDVAM VILVPVQIAG
501: QLAPKVFPLD ITYFDPPTKG SAFWQAPRNY AELLSGALLL RFLICNTLKY LQPGPLLQKL LLYWSATTRR VLGLLDLLIA WSAGDGECED GNGSTRKFHH
601: GSTSEDEYKR
101: LGLANKLMGW FFLLLSLLAA MYIWEFVMPF TTLWIWRLAL ARSFARVRHL LSLRIFAHAH GHGAPLYGLM PSPDAVFACV SIRRAFLRDL PHFRDLNPLA
201: RFAAHALAPF ALWIARLETR LDRRFGGLDS LQVIALHTVE ASLMVVLLDV MLACVFGFIP FSLGRIILFC TSCFSFGNMD RVHSYTSTSS ILLVGYGFIF
301: SLGVLFTGFH TFDQYSRGEH LTIAVFFKVL TNGMYRLFSP LRRLPGIHVM VQMALSFLRL FFRGIINLVT VANISVNLIN VIAIWPLFFG WSVDICASQL
401: FGETIYQKLE LLFASSFAST ALHWLIGCIY LMLLSIFSSP LCLVLGPGVT IPFVHFSGEE SLIQLFREPF YKFSLKLLPG LFVSAVDVAM VILVPVQIAG
501: QLAPKVFPLD ITYFDPPTKG SAFWQAPRNY AELLSGALLL RFLICNTLKY LQPGPLLQKL LLYWSATTRR VLGLLDLLIA WSAGDGECED GNGSTRKFHH
601: GSTSEDEYKR
0001: MEISPADSLS ISGAAASEVV SEPSVSSSSS SSSPNQASPN PFSNMDPAVS TATGSRYVDD DEDEEDVCRI CRNPGDADNP LRYPCACSGS IKFVHQDCLL
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
0101: QWLNHSNARQ CEVCKHPFSF SPVYADNAPS RLPFQEFVVG IAMKACHVLQ FFLRLSFVLS VWLLTIPFIT FWIWRLAFVR TFGEAQRLFL SHISTTVILT
0201: DCLHGFLLSA SIVFIFLGAT SLRDYFRHLR ELGGQEERDD DVDRNGARAA RRPAGQANRN LAGEGNGEDA GDQGAAVGQI ARRNPENVLA RLDIQAARLE
0301: AQVEQMFDGL DDADGAEDVP FDELVGMQGP VFHLVENAFT VLASNMIFLG VVIFVPFTLG RIILYHVSWL FAAARGPAVA ASLHLTDTGL SLENITLKSA
0401: LTAVSNLTSE GQGNGLLGQL TEMMKVNGSE LNGANNTLSV ATDLLKGSTV GASKLSDITT LAVGYMFIVF LVFLYLGIIA LIRYAKGEPL TVGRFYGIAS
0501: IVEAVPSLLR QFLAAMRHLM TMIKVAFLLV IELGVFPLMC GWWLDVCTVR MFGKTMSHRV QFLSISPLAS SLVHWVVGIM YMLQISIFVS LLRGVLRPGV
0601: LYFLRDPADP NYNPFRDLID DPVHKHARRV LLSVAVYGSL IVMLVFLPVK LAIRMAPSIF PLDISVSDPF TEIPADMLLF QICIPFIIEH FRLRTTIKSL
0701: LRCWFTGVGW ALGLTDFLLP RPEDNIGQDN GNGEPGRQNR AQVLQVGGPD RAMAALPVAD DPNRSRLRAG NVNTGEEYED DDEQSDSEYN FVVRIILLLL
0801: VAWVTLLLFN SALIVVPVSL GRALFSAIPI LPITHGIKCN DLYAFVIGTY AFWTTISGAR YAIEHVKSKR TSVLLNQIWK WCGIVFKSSV LLAIWVFIIP
0901: VLIGLLFELL VIVPMRVPVD ESPVFLLYQD WALGLIFLKI WTRLVMLDHM LPIVDDSWRA KFERVREDGF SRLQGLWVLR EIVFPIVMKL LTALCVPYVL
1001: ARGVFPMLGY PLVVNSAVYR FAWIGCLSVS LFCFCAKRCH VWFRNLHNSI RDDRYLIGRR LHNFGEAALA NQNQNQSSED AGDGVLIGRE GDVDNGLRLR
1101: RAIQQEA
Arabidopsis Description
SUD1Probable E3 ubiquitin ligase SUD1 [Source:UniProtKB/Swiss-Prot;Acc:F4JKK0]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.