Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42156 | Canola | nucleus | 90.95 | 91.84 |
| Bra034751.1-P | Field mustard | nucleus | 85.14 | 86.82 |
| AT3G12560.2 | Thale cress | nucleus | 74.47 | 74.47 |
| CDY50529 | Canola | nucleus | 71.57 | 72.98 |
| CDY50353 | Canola | nucleus | 71.08 | 72.37 |
| CDX91094 | Canola | nucleus | 47.98 | 53.32 |
| CDX70522 | Canola | nucleus | 49.6 | 53.11 |
| CDX85624 | Canola | mitochondrion | 46.53 | 52.84 |
| CDX78540 | Canola | nucleus | 51.7 | 52.37 |
| CDY68172 | Canola | nucleus | 44.59 | 48.94 |
| CDX69626 | Canola | nucleus | 46.53 | 48.57 |
| KRG97906 | Soybean | nucleus | 47.17 | 43.32 |
| KRH30983 | Soybean | nucleus | 46.53 | 42.42 |
| CDY30842 | Canola | nucleus | 19.06 | 41.84 |
| VIT_13s0019g01670.t01 | Wine grape | nucleus, plastid | 45.72 | 40.2 |
| PGSC0003DMT400060234 | Potato | nucleus | 44.26 | 39.77 |
| Solyc05g054410.2.1 | Tomato | nucleus | 43.94 | 39.48 |
| CDY06712 | Canola | nucleus | 35.54 | 36.91 |
| CDY15617 | Canola | nucleus | 34.41 | 36.1 |
| PGSC0003DMT400016260 | Potato | nucleus | 38.61 | 35.67 |
| CDY10282 | Canola | nucleus | 34.57 | 35.67 |
| Solyc04g011650.2.1 | Tomato | nucleus | 37.96 | 35.23 |
| CDX86474 | Canola | nucleus | 29.4 | 32.67 |
| CDY33039 | Canola | nucleus | 34.41 | 25.76 |
| CDX80268 | Canola | nucleus | 34.25 | 25.6 |
Protein Annotations
| Gene3D:1.10.246.220 | MapMan:15.5.2.2 | GO:A0A078F9H0 | UniProt:A0A078F9H0 | EnsemblPlants:CDY08423 | ProteinID:CDY08423 |
| ProteinID:CDY08423.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00000182001 | InterPro:Homeobox-like_sf | InterPro:IPR000626 | InterPro:IPR017930 | InterPro:Myb_dom | PFscan:PS50053 |
| PFscan:PS51294 | PANTHER:PTHR21717 | PANTHER:PTHR21717:SF60 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| SUPFAM:SSF54236 | UniParc:UPI0004EDED79 | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : |
Description
BnaA05g26590DBnaA05g26590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9H0]
Coordinates
chrLK031986:+:140698..144152
Molecular Weight (calculated)
68654.9 Da
IEP (calculated)
9.111
GRAVY (calculated)
-0.705
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFKRKLDCV SVAFDYPNIP KAPRSCRRKV QNKRTDDDDD AKMCAMDLLA SLAGKILEEG QSSSASSNAF EGNTHENFGK EIKTEREDHD KPLKSESSDQ
101: GNSVSMPTYE NTSDKCAVNS FSFPDNDGIL ERTPMSDHKK IHGETGDVHV NPGFEQGEAT GGLTTNTCNL EDKTALDVQF PKPVCVDDGD LKSPSFVNMT
201: PNGSLARHGN RTNLGRDDDE KLYSYRKCSN KFTSYKSPAI RRIRKSKYWK QVSKDFGHYR ADVGIKALYR KRKSCYGYNT WKHETIYKRR RSPDRSSVVT
301: SDGGLCNGSV SKLPQKRDSV KLSIKSFRIP ELFIEVPKTA TVGSLKRTVM EAVSVLLSGG IRVGVLVHGK KVRDDKRTLS QTGISSEENL NNLGFTLEPG
401: GTSKVPIPLC SKDPVVPTTE LASLCERSAA ASPTLDSGVP HADDVFNSGN VVDNNLELVP YQSEVSVDEP SSDSRALVPL PALEEVKALA IVPLNQKPKR
501: TELAQRRARR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF ENADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLKAYGYWS QHQGKHQARG
601: APKDPDMNRG RALESGVSV
101: GNSVSMPTYE NTSDKCAVNS FSFPDNDGIL ERTPMSDHKK IHGETGDVHV NPGFEQGEAT GGLTTNTCNL EDKTALDVQF PKPVCVDDGD LKSPSFVNMT
201: PNGSLARHGN RTNLGRDDDE KLYSYRKCSN KFTSYKSPAI RRIRKSKYWK QVSKDFGHYR ADVGIKALYR KRKSCYGYNT WKHETIYKRR RSPDRSSVVT
301: SDGGLCNGSV SKLPQKRDSV KLSIKSFRIP ELFIEVPKTA TVGSLKRTVM EAVSVLLSGG IRVGVLVHGK KVRDDKRTLS QTGISSEENL NNLGFTLEPG
401: GTSKVPIPLC SKDPVVPTTE LASLCERSAA ASPTLDSGVP HADDVFNSGN VVDNNLELVP YQSEVSVDEP SSDSRALVPL PALEEVKALA IVPLNQKPKR
501: TELAQRRARR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF ENADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLKAYGYWS QHQGKHQARG
601: APKDPDMNRG RALESGVSV
001: MVFKRKLDCL SVGFDFPNIP RAPRSCRRKV LNKRIDHDDD NTQICAIDLL ALAGKILQES ESSSASSNAF EEIKQEKVEN CKTIKSESSD QGNSVSKPTY
101: DISTEKCVVN SCFSFPDSDG VLERTPMSDY KKIHGLMDVG CENKNVNNGF EQGEATDRVG DGGLVTDTCN LEDATALGLQ FPKSVCVGGD LKSPSTLDMT
201: PNGSYARHGN HTNLGRKDDD EKFYSYHKLS NKFKSYRSPT IRRIRKSMSS KYWKQVPKDF GYSRADVGVK TLYRKRKSCY GYNAWQREII YKRRRSPDRS
301: SVVTSDGGLS SGSVSKLPKK GDTVKLSIKS FRIPELFIEV PETATVGSLK RTVMEAVSVL LSGGIRVGVL MHGKKVRDER KTLSQTGISC DENLDNLGFT
401: LEPSPSKVPL PLCSEDPAVP TDPTSLSERS AASPMLDSGI PHADDVIDSR NIVDSNLELV PYQGDISVDE PSSDSKELVP LPELEVKALA IVPLNQKPKR
501: TELAQRRTRR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF EDADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLRAYGYWS QHQGKHQARG
601: ASKDPDMNRG GAFESGVSV
101: DISTEKCVVN SCFSFPDSDG VLERTPMSDY KKIHGLMDVG CENKNVNNGF EQGEATDRVG DGGLVTDTCN LEDATALGLQ FPKSVCVGGD LKSPSTLDMT
201: PNGSYARHGN HTNLGRKDDD EKFYSYHKLS NKFKSYRSPT IRRIRKSMSS KYWKQVPKDF GYSRADVGVK TLYRKRKSCY GYNAWQREII YKRRRSPDRS
301: SVVTSDGGLS SGSVSKLPKK GDTVKLSIKS FRIPELFIEV PETATVGSLK RTVMEAVSVL LSGGIRVGVL MHGKKVRDER KTLSQTGISC DENLDNLGFT
401: LEPSPSKVPL PLCSEDPAVP TDPTSLSERS AASPMLDSGI PHADDVIDSR NIVDSNLELV PYQGDISVDE PSSDSKELVP LPELEVKALA IVPLNQKPKR
501: TELAQRRTRR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF EDADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLRAYGYWS QHQGKHQARG
601: ASKDPDMNRG GAFESGVSV
Arabidopsis Description
TRP3Telomere repeat-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7B1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.