CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030689.1-P	Field mustard	nucleus	98.31	95.55
CDX86474	Canola	nucleus	85.93	91.02
CDY06712	Canola	nucleus	74.75	73.99
CDY10282	Canola	nucleus	74.75	73.5
AT1G07540.1	Thale cress	nucleus	73.22	68.57
CDY30842	Canola	nucleus	21.86	45.74
GSMUA_Achr10P...	Banana	cytosol, plastid	5.76	36.96
GSMUA_Achr8P20810_001	Banana	nucleus	40.68	36.87
CDX91094	Canola	nucleus	34.41	36.45
CDY50353	Canola	nucleus	37.29	36.18
CDX78540	Canola	nucleus	37.12	35.84
CDX70522	Canola	nucleus	35.08	35.81
CDX85624	Canola	mitochondrion	33.05	35.78
CDY50529	Canola	nucleus	36.1	35.09
CDY68172	Canola	nucleus	33.39	34.93
CDY42156	Canola	nucleus	36.27	34.91
GSMUA_Achr7P15090_001	Banana	nucleus	40.51	34.49
GSMUA_Achr9P03910_001	Banana	mitochondrion, nucleus	37.63	34.42
CDY08423	Canola	nucleus	36.1	34.41
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	41.36	34.27
Os03t0274300-01	Rice	nucleus	38.47	32.8
CDX69626	Canola	nucleus	32.71	32.55
KXG39691	Sorghum	nucleus, plastid	38.81	32.44
TraesCS4B01G207700.1	Wheat	nucleus	37.29	31.79
HORVU4Hr1G059800.2	Barley	nucleus	37.12	31.69
TraesCS4D01G208600.1	Wheat	nucleus	36.95	31.55
TraesCS4A01G096700.1	Wheat	nucleus	36.95	31.55
TraesCS3D01G533700.1	Wheat	nucleus, plastid	33.05	30.0
TraesCS3B01G597500.1	Wheat	nucleus, plastid	32.88	29.8
TraesCS3A01G528500.1	Wheat	nucleus, plastid	32.71	29.65
HORVU3Hr1G115540.2	Barley	nucleus, plastid	32.71	29.33
Zm00001d047808_P001	Maize	nucleus, plastid	36.61	28.92
EES10985	Sorghum	mitochondrion	31.69	28.77
Zm00001d028608_P006	Maize	nucleus	33.39	28.3
CDX80268	Canola	nucleus	33.56	23.91
CDY33039	Canola	nucleus	33.39	23.82
TraesCS6D01G378100.1	Wheat	nucleus	26.27	23.1
TraesCS6A01G392300.1	Wheat	nucleus	26.1	22.95
TraesCS6B01G432500.1	Wheat	nucleus	26.1	22.95
HORVU6Hr1G091110.8	Barley	cytosol, nucleus, plastid	22.88	17.37
Zm00001d025679_P001	Maize	cytosol, nucleus, plastid	26.44	17.2
Os02t0817800-03	Rice	nucleus	11.19	10.43

Protein Annotations

EnsemblPlants:CDY15617	EnsemblPlantsGene:GSBRNA2T00089804001	Gene3D:1.10.246.220	GO:A0A078FRZ6	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR21717	PANTHER:PTHR21717:SF38	PFscan:PS51294	ProteinID:CDY15617	ProteinID:CDY15617.1	SEG:seg
SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI0004EE6625	UniProt:A0A078FRZ6	MapMan:15.5.2.2	:

Description

BnaA08g29010DBnaA08g29010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FRZ6]

Coordinates

chrLK032055:-:744558..747095

Molecular Weight (calculated)

65847.0 Da

IEP (calculated)

9.599

GRAVY (calculated)

-0.733

Length

590 amino acids

Sequence
(BLAST)

001: MVLQTRLDYG FNGYEVPPTP RAARSPRKSA FKKKSENNQI SSSFDLLAAV AGKLLLESGG VSSSSSNNAS GDNNEDQCGG KKESGDQMVV GETHCDHHHD
101: NNAERSFFVS EILPKAHEME SFNRSPNPNK DFLFGSTSGI TYEYSSEKLG TQELAYEEAK IHNGDCFRSD SNGKKPMLER LNCEPELSRN KDKHHIDNSL
201: NGMENNDGEN FSALKKVMSS KYCKVSSNQK DTMVAGSDLD LKPGYYSKKH CFKSLRSEKK YPIKKRRYFD GYTASQSEET VRNEGLSGSP RKAFLSTIAC
301: QKQPALQSRD SHVKLGIKSF RVPELSIEVP ETATIGSLKR TVLEAVTTIL EGGLRIGVLV HGKKVRDDNK MLLQTGISLD TLSDTLSFCL ETNPPQSTKP
401: LSPKDSDYMR PCYVPHTITR CLPSLGKHAK PSDSVESDLD SKPSSPFRAK PVYSRALIPV SPPLHAQALN VVPPRKPKRS EVAQRRIRRP FSVAEVEALV
501: QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR VLMAHAYWSQ QQGKQQLLEG PQNLETSLGL

Best Arabidopsis Sequence Match ( AT1G07540.1 )
(BLAST)

001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL

Arabidopsis Description

TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.