Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 66.51 | 60.81 |
| GSMUA_Achr7P15090_001 | Banana | nucleus | 63.9 | 60.03 |
| GSMUA_Achr9P03910_001 | Banana | mitochondrion, nucleus | 52.07 | 52.56 |
| VIT_06s0004g04940.t01 | Wine grape | nucleus | 50.23 | 46.98 |
| Os03t0274300-01 | Rice | nucleus | 46.85 | 44.08 |
| Solyc06g005590.2.1 | Tomato | nucleus | 46.24 | 43.69 |
| KXG39691 | Sorghum | nucleus, plastid | 47.31 | 43.63 |
| HORVU4Hr1G059800.2 | Barley | nucleus | 45.31 | 42.69 |
| AT3G46590.2 | Thale cress | nucleus | 36.25 | 42.68 |
| TraesCS4B01G207700.1 | Wheat | nucleus | 45.31 | 42.63 |
| KRG99966 | Soybean | nucleus | 39.32 | 42.45 |
| TraesCS4D01G208600.1 | Wheat | nucleus | 45.01 | 42.4 |
| VIT_13s0019g01670.t01 | Wine grape | nucleus, plastid | 45.78 | 42.33 |
| TraesCS4A01G096700.1 | Wheat | nucleus | 44.85 | 42.26 |
| PGSC0003DMT400005476 | Potato | nucleus | 44.85 | 42.2 |
| CDY06712 | Canola | nucleus | 38.56 | 42.11 |
| AT5G59430.2 | Thale cress | nucleus | 37.17 | 41.87 |
| Bra015585.1-P | Field mustard | nucleus | 38.4 | 41.81 |
| AT1G07540.1 | Thale cress | nucleus | 40.4 | 41.75 |
| KRH49110 | Soybean | nucleus | 38.71 | 41.58 |
| CDY10282 | Canola | nucleus | 37.94 | 41.17 |
| KRG97906 | Soybean | nucleus | 42.24 | 40.8 |
| PGSC0003DMT400077969 | Potato | nucleus | 43.47 | 40.72 |
| CDY15617 | Canola | nucleus | 36.87 | 40.68 |
| KRH30983 | Soybean | nucleus | 42.24 | 40.5 |
| VIT_08s0007g00500.t01 | Wine grape | nucleus | 42.55 | 40.32 |
| Bra030689.1-P | Field mustard | nucleus | 37.48 | 40.2 |
| Bra002566.1-P | Field mustard | nucleus | 35.02 | 40.07 |
| Solyc06g076270.2.1 | Tomato | nucleus | 43.01 | 40.0 |
| PGSC0003DMT400060234 | Potato | nucleus | 42.24 | 39.91 |
| TraesCS3D01G533700.1 | Wheat | nucleus, plastid | 39.63 | 39.69 |
| Solyc05g054410.2.1 | Tomato | nucleus | 41.94 | 39.62 |
| KRH29783 | Soybean | nucleus | 41.94 | 39.57 |
| TraesCS3A01G528500.1 | Wheat | nucleus, plastid | 39.48 | 39.48 |
| Zm00001d028608_P006 | Maize | nucleus | 42.09 | 39.37 |
| KRH24782 | Soybean | nucleus | 37.94 | 39.33 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 5.53 | 39.13 |
| TraesCS3B01G597500.1 | Wheat | nucleus, plastid | 39.02 | 39.02 |
| HORVU3Hr1G115540.2 | Barley | nucleus, plastid | 39.32 | 38.91 |
| KRH23087 | Soybean | nucleus | 42.86 | 38.86 |
| Zm00001d047808_P001 | Maize | nucleus, plastid | 44.39 | 38.69 |
| KRH10245 | Soybean | nucleus | 42.55 | 38.47 |
| PGSC0003DMT400016260 | Potato | nucleus | 39.48 | 38.36 |
| CDX86474 | Canola | nucleus | 32.41 | 37.88 |
| EES10985 | Sorghum | mitochondrion | 37.79 | 37.85 |
| Solyc04g011650.2.1 | Tomato | nucleus | 38.71 | 37.78 |
| Solyc12g027690.1.1 | Tomato | extracellular | 7.68 | 32.26 |
| TraesCS6B01G432500.1 | Wheat | nucleus | 31.18 | 30.25 |
| TraesCS6D01G378100.1 | Wheat | nucleus | 31.03 | 30.1 |
| TraesCS6A01G392300.1 | Wheat | nucleus | 30.88 | 29.96 |
| Solyc12g027710.1.1 | Tomato | cytosol | 10.45 | 28.1 |
| CDY33039 | Canola | nucleus | 34.56 | 27.21 |
| CDX80268 | Canola | nucleus | 34.56 | 27.17 |
| Zm00001d025679_P001 | Maize | cytosol, nucleus, plastid | 32.26 | 23.15 |
| HORVU6Hr1G091110.8 | Barley | cytosol, nucleus, plastid | 27.5 | 23.04 |
| Os02t0817800-03 | Rice | nucleus | 16.13 | 16.59 |
Protein Annotations
| Gene3D:1.10.246.220 | MapMan:15.5.2.2 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr8G20810_001 | EnsemblPlants:GSMUA_Achr8P20810_001 | EnsemblPlants:GSMUA_Achr8T20810_001 | InterPro:Homeobox-like_sf | InterPro:IPR000626 |
| InterPro:IPR017930 | UniProt:M0TS84 | InterPro:Myb_dom | PFscan:PS50053 | PFscan:PS51294 | PANTHER:PTHR21717 |
| PANTHER:PTHR21717:SF38 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | SUPFAM:SSF54236 | UniParc:UPI0002953F8B |
| InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_dom | SEG:seg | : | : | : |
Description
Putative Telomere-binding protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G20810_001]
Coordinates
chr8:+:25896460..25900053
Molecular Weight (calculated)
71409.7 Da
IEP (calculated)
8.515
GRAVY (calculated)
-0.596
Length
651 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLQKRVDCG SSGYQAPVMP HFPRSAKGKR SVRKKVEDNQ MCAFDLLATV AGNLLSEREN SLTPCNDTGT SNTVAVKDTV NQDQLDKEKP CKLEAFDWLR
101: CSEDLSGPEN DLKMQIKHDI RENTSKATSP YSSPAGSLEC KEDGSKTPQQ AERLVAGNAV DGNAPHTYSL NDAMDLDGKT PALVSSDSSF EVPLYRKNTP
201: CNSSFPKQDE CMDLPIDKDG DENSSGCTHP TIVTNKASRL QRIGDRRIRK LLASKFWKVS PTMLQDDVDQ KPALRGKRMC YTRQRTQRSS FKRRKLFYNC
301: SVSASDGGIY SEGVSNICEK GRIKLETNDL HATWFGANSA PSSTTGQKPC CELPDYHVKL SIKSFKVPEL LIEIPETATV GSLKRTVSEA VTAILGGGLR
401: IGVLLQGKKV RHDNKTLRQA GISQGDKLDN LGFTLEPNPG QAPAPLTGSE DPHFLGLGCA PEPLPLARIP PTAPATTDQR VSDASPQPMT TCPESDHDSV
501: YSPADASSPE KTTANSLALV AVPPTNVEAL AMVPLRSKPK RPEAAQRRVR RPFSVAEVEA LVQAVEKLGT GRWRDVKLCA FENANHRTYV DLKDKWKTLV
601: HTARISPQQR RGEPVPQELL DRVLAAHAYW SQHQAKLQLK PPPSAEICQL L
101: CSEDLSGPEN DLKMQIKHDI RENTSKATSP YSSPAGSLEC KEDGSKTPQQ AERLVAGNAV DGNAPHTYSL NDAMDLDGKT PALVSSDSSF EVPLYRKNTP
201: CNSSFPKQDE CMDLPIDKDG DENSSGCTHP TIVTNKASRL QRIGDRRIRK LLASKFWKVS PTMLQDDVDQ KPALRGKRMC YTRQRTQRSS FKRRKLFYNC
301: SVSASDGGIY SEGVSNICEK GRIKLETNDL HATWFGANSA PSSTTGQKPC CELPDYHVKL SIKSFKVPEL LIEIPETATV GSLKRTVSEA VTAILGGGLR
401: IGVLLQGKKV RHDNKTLRQA GISQGDKLDN LGFTLEPNPG QAPAPLTGSE DPHFLGLGCA PEPLPLARIP PTAPATTDQR VSDASPQPMT TCPESDHDSV
501: YSPADASSPE KTTANSLALV AVPPTNVEAL AMVPLRSKPK RPEAAQRRVR RPFSVAEVEA LVQAVEKLGT GRWRDVKLCA FENANHRTYV DLKDKWKTLV
601: HTARISPQQR RGEPVPQELL DRVLAAHAYW SQHQAKLQLK PPPSAEICQL L
001: MVVKRKLNCG GSNGFDFPNI PKAPRSSRRK VSGKRSDDES EICAIDLLAS LAGKLLEESE SSSTSTYASE ADNLDHLGGL IKQELEDGYT TKPCKSEFFD
101: PGNPASKSTS ENTSVTCLPF SSFENDCILE QTPVSDCKRA SGLKSLVGSI TEETCVVNED AGSEQGANTF SLKDPSQLHS QSPESVLLDG DVKLAPCTDQ
201: VPNDSFKGYR NHSKLVCRDD DENYCKYYKF SDKCKSYRPL SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL KALYRKRKLC YGYNPWKRET IHRKRRLSDK
301: GLVVNYDGGL SSESVSNSPE KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP ETATVGLLKR TVKEAVTALL GGGIRIGVLV QGKKVRDDNN
401: TLSQTGLSCR ENLGNLGFTL EPGLETLPVP LCSETPVLSL PTDSTKLSER SAASPALETG IPLPPQDEDY LINLGNSVEN NDELVPHLSD IPADEQPSSD
501: SRALVPVLAL ESDALALVPV NEKPKRTELS QRRTRRPFSV TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI SPQQRRGEPV
601: PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM
101: PGNPASKSTS ENTSVTCLPF SSFENDCILE QTPVSDCKRA SGLKSLVGSI TEETCVVNED AGSEQGANTF SLKDPSQLHS QSPESVLLDG DVKLAPCTDQ
201: VPNDSFKGYR NHSKLVCRDD DENYCKYYKF SDKCKSYRPL SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL KALYRKRKLC YGYNPWKRET IHRKRRLSDK
301: GLVVNYDGGL SSESVSNSPE KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP ETATVGLLKR TVKEAVTALL GGGIRIGVLV QGKKVRDDNN
401: TLSQTGLSCR ENLGNLGFTL EPGLETLPVP LCSETPVLSL PTDSTKLSER SAASPALETG IPLPPQDEDY LINLGNSVEN NDELVPHLSD IPADEQPSSD
501: SRALVPVLAL ESDALALVPV NEKPKRTELS QRRTRRPFSV TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI SPQQRRGEPV
601: PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM
Arabidopsis Description
TRP4Telomere repeat-binding protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFY9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.