Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- plasma membrane 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15617 | Canola | nucleus | 36.96 | 5.76 |
| CDY06712 | Canola | nucleus | 36.96 | 5.7 |
| Bra015585.1-P | Field mustard | nucleus | 36.96 | 5.69 |
| CDY10282 | Canola | nucleus | 36.96 | 5.67 |
| AT3G46590.2 | Thale cress | nucleus | 33.7 | 5.61 |
| Bra030689.1-P | Field mustard | nucleus | 36.96 | 5.6 |
| GSMUA_Achr8P20810_001 | Banana | nucleus | 39.13 | 5.53 |
| KRG97906 | Soybean | nucleus | 39.13 | 5.34 |
| GSMUA_Achr7P15090_001 | Banana | nucleus | 40.22 | 5.34 |
| KRH30983 | Soybean | nucleus | 39.13 | 5.3 |
| Bra002566.1-P | Field mustard | nucleus | 32.61 | 5.27 |
| AT5G59430.2 | Thale cress | nucleus | 32.61 | 5.19 |
| AT1G07540.1 | Thale cress | nucleus | 34.78 | 5.08 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 39.13 | 5.06 |
| GSMUA_Achr9P03910_001 | Banana | mitochondrion, nucleus | 34.78 | 4.96 |
| KRH24782 | Soybean | nucleus | 33.7 | 4.94 |
| PGSC0003DMT400077969 | Potato | nucleus | 36.96 | 4.89 |
| Solyc06g076270.2.1 | Tomato | nucleus | 36.96 | 4.86 |
| Solyc05g054410.2.1 | Tomato | nucleus | 35.87 | 4.79 |
| PGSC0003DMT400060234 | Potato | nucleus | 35.87 | 4.79 |
| Solyc06g005590.2.1 | Tomato | nucleus | 35.87 | 4.79 |
| PGSC0003DMT400005476 | Potato | nucleus | 35.87 | 4.77 |
| VIT_06s0004g04940.t01 | Wine grape | nucleus | 35.87 | 4.74 |
| KRH23087 | Soybean | nucleus | 36.96 | 4.74 |
| KRH10245 | Soybean | nucleus | 36.96 | 4.72 |
| VIT_13s0019g01670.t01 | Wine grape | nucleus, plastid | 35.87 | 4.69 |
| KXG39691 | Sorghum | nucleus, plastid | 35.87 | 4.67 |
| VIT_08s0007g00500.t01 | Wine grape | nucleus | 34.78 | 4.66 |
| KRH29783 | Soybean | nucleus | 34.78 | 4.64 |
| Os03t0274300-01 | Rice | nucleus | 34.78 | 4.62 |
| Zm00001d028608_P006 | Maize | nucleus | 34.78 | 4.6 |
| HORVU4Hr1G059800.2 | Barley | nucleus | 33.7 | 4.49 |
| TraesCS4D01G208600.1 | Wheat | nucleus | 33.7 | 4.49 |
| TraesCS4A01G096700.1 | Wheat | nucleus | 33.7 | 4.49 |
| TraesCS4B01G207700.1 | Wheat | nucleus | 33.7 | 4.48 |
| KRG99966 | Soybean | nucleus | 29.35 | 4.48 |
| KRH49110 | Soybean | nucleus | 29.35 | 4.46 |
| Zm00001d047808_P001 | Maize | nucleus, plastid | 35.87 | 4.42 |
| Solyc04g011650.2.1 | Tomato | nucleus | 31.52 | 4.35 |
| TraesCS3D01G533700.1 | Wheat | nucleus, plastid | 30.43 | 4.31 |
| EES10985 | Sorghum | mitochondrion | 30.43 | 4.31 |
| TraesCS3A01G528500.1 | Wheat | nucleus, plastid | 30.43 | 4.3 |
| TraesCS3B01G597500.1 | Wheat | nucleus, plastid | 30.43 | 4.3 |
| HORVU3Hr1G115540.2 | Barley | nucleus, plastid | 30.43 | 4.26 |
| PGSC0003DMT400016260 | Potato | nucleus | 30.43 | 4.18 |
| CDX80268 | Canola | nucleus | 33.7 | 3.74 |
| TraesCS6A01G392300.1 | Wheat | nucleus | 27.17 | 3.73 |
| TraesCS6B01G432500.1 | Wheat | nucleus | 27.17 | 3.73 |
| TraesCS6D01G378100.1 | Wheat | nucleus | 27.17 | 3.73 |
| CDY33039 | Canola | nucleus | 32.61 | 3.63 |
| CDX86474 | Canola | nucleus | 20.65 | 3.41 |
| HORVU6Hr1G091110.8 | Barley | cytosol, nucleus, plastid | 23.91 | 2.83 |
| Zm00001d025679_P001 | Maize | cytosol, nucleus, plastid | 26.09 | 2.65 |
| Solyc12g027690.1.1 | Tomato | extracellular | 4.35 | 2.58 |
| Solyc12g027710.1.1 | Tomato | cytosol | 5.43 | 2.07 |
| Os02t0817800-03 | Rice | nucleus | 6.52 | 0.95 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P02450_001 | EnsemblPlants:GSMUA_Achr10T02450_001 | EnsemblPlantsGene:GSMUA_Achr10G02450_001 | Gene3D:1.10.246.220 | PANTHER:PTHR21717 | PANTHER:PTHR21717:SF60 |
| SEG:seg | UniParc:UPI0002965D80 | UniProt:M0RES2 | MapMan:35.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G02450_001]
Coordinates
chr10:+:7213539..7213892
Molecular Weight (calculated)
11405.8 Da
IEP (calculated)
10.881
GRAVY (calculated)
-0.488
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MWSHWPWFHH AYNNKPKRHE VSPRRVRRPF LLCRRSFFLT AACIHWFRWR DVKLSDFENA KHRTYVDLRV INNTTTNSGM FDYVLFMFPL CT
001: MVVKRKLNCG GSNGFDFPNI PKAPRSSRRK VSGKRSDDES EICAIDLLAS LAGKLLEESE SSSTSTYASE ADNLDHLGGL IKQELEDGYT TKPCKSEFFD
101: PGNPASKSTS ENTSVTCLPF SSFENDCILE QTPVSDCKRA SGLKSLVGSI TEETCVVNED AGSEQGANTF SLKDPSQLHS QSPESVLLDG DVKLAPCTDQ
201: VPNDSFKGYR NHSKLVCRDD DENYCKYYKF SDKCKSYRPL SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL KALYRKRKLC YGYNPWKRET IHRKRRLSDK
301: GLVVNYDGGL SSESVSNSPE KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP ETATVGLLKR TVKEAVTALL GGGIRIGVLV QGKKVRDDNN
401: TLSQTGLSCR ENLGNLGFTL EPGLETLPVP LCSETPVLSL PTDSTKLSER SAASPALETG IPLPPQDEDY LINLGNSVEN NDELVPHLSD IPADEQPSSD
501: SRALVPVLAL ESDALALVPV NEKPKRTELS QRRTRRPFSV TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI SPQQRRGEPV
601: PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM
101: PGNPASKSTS ENTSVTCLPF SSFENDCILE QTPVSDCKRA SGLKSLVGSI TEETCVVNED AGSEQGANTF SLKDPSQLHS QSPESVLLDG DVKLAPCTDQ
201: VPNDSFKGYR NHSKLVCRDD DENYCKYYKF SDKCKSYRPL SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL KALYRKRKLC YGYNPWKRET IHRKRRLSDK
301: GLVVNYDGGL SSESVSNSPE KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP ETATVGLLKR TVKEAVTALL GGGIRIGVLV QGKKVRDDNN
401: TLSQTGLSCR ENLGNLGFTL EPGLETLPVP LCSETPVLSL PTDSTKLSER SAASPALETG IPLPPQDEDY LINLGNSVEN NDELVPHLSD IPADEQPSSD
501: SRALVPVLAL ESDALALVPV NEKPKRTELS QRRTRRPFSV TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI SPQQRRGEPV
601: PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM
Arabidopsis Description
TRP4Telomere repeat-binding protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFY9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.