Factsheet for Os02t0817800-03

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G378100.1	Wheat	nucleus	30.02	28.32
TraesCS6A01G392300.1	Wheat	nucleus	29.7	28.02
TraesCS6B01G432500.1	Wheat	nucleus	29.38	27.72
HORVU6Hr1G091110.8	Barley	cytosol, nucleus, plastid	28.59	23.29
GSMUA_Achr7P15090_001	Banana	nucleus	18.17	16.59
GSMUA_Achr9P03910_001	Banana	mitochondrion, nucleus	16.59	16.28
GSMUA_Achr8P20810_001	Banana	nucleus	16.59	16.13
Os03t0274300-01	Rice	nucleus	15.8	14.45
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	15.96	14.19
AT3G46590.2	Thale cress	nucleus	12.32	14.1
VIT_13s0019g01670.t01	Wine grape	nucleus, plastid	15.48	13.92
VIT_06s0004g04940.t01	Wine grape	nucleus	15.01	13.65
AT5G59430.2	Thale cress	nucleus	12.01	13.15
Bra002566.1-P	Field mustard	nucleus	11.69	13.01
PGSC0003DMT400005476	Potato	nucleus	13.43	12.28
Bra015585.1-P	Field mustard	nucleus	11.53	12.21
PGSC0003DMT400077969	Potato	nucleus	13.27	12.09
VIT_08s0007g00500.t01	Wine grape	nucleus	13.11	12.08
CDY06712	Canola	nucleus	11.37	12.08
PGSC0003DMT400060234	Potato	nucleus	13.11	12.05
KRH23087	Soybean	nucleus	13.59	11.98
KRG97906	Soybean	nucleus	12.64	11.87
Solyc05g054410.2.1	Tomato	nucleus	12.8	11.76
AT1G07540.1	Thale cress	nucleus	11.69	11.75
Solyc06g076270.2.1	Tomato	nucleus	12.95	11.71
CDY10282	Canola	nucleus	11.06	11.67
KRH10245	Soybean	nucleus	13.27	11.67
Solyc06g005590.2.1	Tomato	nucleus	12.48	11.47
Bra030689.1-P	Field mustard	nucleus	10.9	11.37
KRH30983	Soybean	nucleus	12.16	11.34
CDX86474	Canola	nucleus	9.95	11.31
KRH29783	Soybean	nucleus	12.32	11.3
KRH49110	Soybean	nucleus	10.74	11.22
CDY15617	Canola	nucleus	10.43	11.19
Solyc12g027710.1.1	Tomato	cytosol	4.27	11.16
PGSC0003DMT400016260	Potato	nucleus	11.69	11.04
Solyc04g011650.2.1	Tomato	nucleus	11.22	10.64
KRH24782	Soybean	nucleus	9.95	10.03
KRG99966	Soybean	nucleus	9.48	9.95
CDY33039	Canola	nucleus	11.69	8.95
CDX80268	Canola	nucleus	11.53	8.82
Solyc12g027690.1.1	Tomato	extracellular	2.05	8.39
GSMUA_Achr10P...	Banana	cytosol, plastid	0.95	6.52

Protein Annotations

Gene3D:1.10.246.220	MapMan:15.5.2.2	PDB:2ROH	EntrezGene:4331151	EMBL:AF242298	EMBL:AP014958
ProteinID:BAD21526.1	ProteinID:BAD21527.1	ProteinID:BAD22954.1	ProteinID:BAD22955.1	ProteinID:BAF10438.1	GO:GO:0000781
GO:GO:0000783	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003691	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005694
GO:GO:0006139	GO:GO:0006259	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0031627	GO:GO:0032204	GO:GO:0042162	GO:GO:0042803	InterPro:Homeobox-like_sf	InterPro:IPR000626
InterPro:IPR017930	InterPro:Myb_dom	EnsemblPlantsGene:Os02g0817800	EnsemblPlants:Os02t0817800-03	PFscan:PS50053	PFscan:PS51294
PANTHER:PTHR21717	PANTHER:PTHR21717:SF37	UniProt:Q9LL45	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
SUPFAM:SSF54236	UniParc:UPI0001B9E7BD	InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	RefSeq:XP_015625433.1	RefSeq:XP_015625434.1
SEG:seg	:	:	:	:	:

Description

TELOMERE BINDING PROTEIN 1Similar to Telomere binding protein-1. (Os02t0817800-01);Similar to Telomere binding protein-1. (Os02t0817800-02);Telomere binding protein , Establishing and /or maintaining an active telomere configuration (Os02t0817800-03)

Coordinates

chr2:-:35086240..35089695

Molecular Weight (calculated)

69512.9 Da

IEP (calculated)

8.713

GRAVY (calculated)

-0.476

Length

633 amino acids

Sequence
(BLAST)

001: MVLQKRLDYG SHGHRAPIKP RVATLAPVKR STRIRKKQMY ALDLLATAAE KLLADQDNLS SGPNINETPE GYVTSMKPVK AEQFDEAFPL RSVAVKKDDC
101: KGCTVGCAGI CGFLRQANMC LAENSSTQNL ADSVLESLTA KPDVLAKDSF VSSKKSCRLG FGLGTIPEYG SVGVCQPWST RSAEVKQVHR ARPTAIRSQE
201: DSDAAALCAL VETMDLDTKP LAEASSGSNS GVHICGPDRG HNSHPSCLAK VQHAADRDDD ENSSGCVHPS TSGNNRGYIP HYIGDRRIRR LFASRLRKAA
301: RNRICGEMSC KGNKLSLCEK KMPTTRRRVQ QTTLKRKRLA QLYSEKSSDE VKLTIKSFNI PELLIEIPEN ATVGSLKKTV SDAVTTIIER GLRVGILLQG
401: KNIQNDNKTL RQAGICRGKK LNDIGFTLEC EAGQDSHPGV IVPEEMDFVG ASVVDKSATV KCEEPAENQQ LMQDFPGCSL SDPGSVDYPV EWSTQETSAS
501: SQAIVPFADP NSLALANVPL SRSKRPDFGQ RRIRRPFTVA EVELLVEAVE HLGTGRWRDV KFRAFENVHH RTYVDLKDKW KTLVHTASIA PQQRRGAPVP
601: QELLDRVLAA QAYWSEQQAK LHGDPPVPEI CPT

Best Arabidopsis Sequence Match ( AT1G07540.1 )
(BLAST)

001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL

Arabidopsis Description

TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.