Factsheet for GSMUA_Achr7P15090_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P20810_001	Banana	nucleus	60.03	63.9
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	61.47	59.83
GSMUA_Achr9P03910_001	Banana	mitochondrion, nucleus	46.03	49.46
VIT_06s0004g04940.t01	Wine grape	nucleus	47.91	47.7
Os03t0274300-01	Rice	nucleus	44.44	44.51
KXG39691	Sorghum	nucleus, plastid	44.88	44.05
HORVU4Hr1G059800.2	Barley	nucleus	43.29	43.42
TraesCS4B01G207700.1	Wheat	nucleus	43.15	43.21
TraesCS4D01G208600.1	Wheat	nucleus	43.0	43.13
TraesCS4A01G096700.1	Wheat	nucleus	42.86	42.98
Solyc06g005590.2.1	Tomato	nucleus	42.42	42.67
PGSC0003DMT400005476	Potato	nucleus	42.14	42.2
VIT_13s0019g01670.t01	Wine grape	nucleus, plastid	42.71	42.05
AT3G46590.2	Thale cress	nucleus	33.48	41.95
AT1G07540.1	Thale cress	nucleus	37.37	41.11
PGSC0003DMT400077969	Potato	nucleus	41.13	41.01
KRG97906	Soybean	nucleus	39.83	40.95
CDY06712	Canola	nucleus	35.06	40.77
AT5G59430.2	Thale cress	nucleus	33.91	40.66
Bra015585.1-P	Field mustard	nucleus	35.06	40.64
Zm00001d028608_P006	Maize	nucleus	40.69	40.52
CDY15617	Canola	nucleus	34.49	40.51
Bra030689.1-P	Field mustard	nucleus	35.35	40.36
PGSC0003DMT400060234	Potato	nucleus	40.12	40.35
KRH29783	Soybean	nucleus	40.12	40.29
GSMUA_Achr10P...	Banana	cytosol, plastid	5.34	40.22
VIT_08s0007g00500.t01	Wine grape	nucleus	39.83	40.17
KRH30983	Soybean	nucleus	39.11	39.91
KRG99966	Soybean	nucleus	34.49	39.64
Bra002566.1-P	Field mustard	nucleus	32.47	39.54
KRH24782	Soybean	nucleus	35.79	39.49
Solyc05g054410.2.1	Tomato	nucleus	39.25	39.48
KRH49110	Soybean	nucleus	34.49	39.44
Solyc06g076270.2.1	Tomato	nucleus	39.68	39.29
CDY10282	Canola	nucleus	33.91	39.17
Zm00001d047808_P001	Maize	nucleus, plastid	41.7	38.69
TraesCS3A01G528500.1	Wheat	nucleus, plastid	36.08	38.4
KRH10245	Soybean	nucleus	39.68	38.19
KRH23087	Soybean	nucleus	39.54	38.16
TraesCS3D01G533700.1	Wheat	nucleus, plastid	35.79	38.15
EES10985	Sorghum	mitochondrion	35.5	37.85
PGSC0003DMT400016260	Potato	nucleus	36.51	37.76
TraesCS3B01G597500.1	Wheat	nucleus, plastid	35.35	37.63
Solyc04g011650.2.1	Tomato	nucleus	36.22	37.63
HORVU3Hr1G115540.2	Barley	nucleus, plastid	35.06	36.93
CDX86474	Canola	nucleus	29.15	36.27
TraesCS6B01G432500.1	Wheat	nucleus	28.57	29.51
TraesCS6D01G378100.1	Wheat	nucleus	28.28	29.21
TraesCS6A01G392300.1	Wheat	nucleus	28.14	29.06
CDX80268	Canola	nucleus	32.47	27.17
Solyc12g027690.1.1	Tomato	extracellular	6.06	27.1
CDY33039	Canola	nucleus	32.32	27.09
Solyc12g027710.1.1	Tomato	cytosol	8.95	25.62
Zm00001d025679_P001	Maize	cytosol, nucleus, plastid	30.3	23.15
HORVU6Hr1G091110.8	Barley	cytosol, nucleus, plastid	25.11	22.39
Os02t0817800-03	Rice	nucleus	16.59	18.17

Protein Annotations

Gene3D:1.10.246.220	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr7G15090_001	EnsemblPlants:GSMUA_Achr7P15090_001	EnsemblPlants:GSMUA_Achr7T15090_001	InterPro:Homeobox-like_sf	InterPro:IPR000626
InterPro:IPR017930	UniProt:M0THP6	InterPro:Myb_dom	PFscan:PS50053	PFscan:PS51294	PANTHER:PTHR21717
PANTHER:PTHR21717:SF60	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF54236	UniParc:UPI0002948787
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

Putative Telomere-binding protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G15090_001]

Coordinates

chr7:+:12109267..12113387

Molecular Weight (calculated)

75755.6 Da

IEP (calculated)

8.193

GRAVY (calculated)

-0.611

Length

693 amino acids

Sequence
(BLAST)

001: MVLQKRLDYA CGGYRAPAMP HLPRSARGKR SARKKVEDNQ TYAFDLLATI AGKLLSEIKS SPSPCNSTGT SNAAAGRDAA KQEQIDEEKS LKCEGFDWLS
101: CNEAVFSPEN ALEKHITYKL KENSNVPKDS SSGPASPFIK SDLSDEDAIG GDGSRIEHGV GAAAEKCIKG SLSSSSVESY DRKEDGGKKL LVAEQQVAGN
201: FMDRNAPYKY SLDDPLVMDV KPSLVSSDSS VEAPLYRNNI SRNYSFPKQE DGMDLAADKD DDENSSGCTH PTPVANKTSR MPRIGDRRIR KLMSSKLRKV
301: APTVLQDAGT SNYDVEQKPA LRGKRMCYTR QRTQRSSFKR RKLFDHCPVS PYDGGIYGEG LSKMSESSRI KLETDDSHAT LCGANGASSF TTGQNCCYES
401: PDYHVKLSIK SFKVPELVIE IPETATVGSL KRTVLEAVTA ILGGRPRVGV LQEGKKVRDD NKTLRQAGIT YGDKLDNLSF TMEPNPEEAL VPPPSSEDPD
501: FLGLACAPEP LARMPPIAPA AAAAVDQRGP DSAESVQTCP EMDHDSFHSP IDPSSPEKTT ASALALVAVP PMDVEALAMV PLGNKPKRSE TPQRRVRRPF
601: SVAEVEALVL AVENLGTGRW RDVKLRAFEN AKHRTYVDLK DKWKTLVHTA RISPQQRRGE PVPQELLDRV LSAHSSWSQK QAKLLLKPPA PLC

Best Arabidopsis Sequence Match ( AT1G07540.1 )
(BLAST)

001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL

Arabidopsis Description

TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.