Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 4
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY06712 | Canola | nucleus | 95.82 | 96.14 |
Bra030689.1-P | Field mustard | nucleus | 75.25 | 74.14 |
AT1G07540.1 | Thale cress | nucleus | 72.58 | 68.89 |
Bra002566.1-P | Field mustard | nucleus | 36.79 | 38.66 |
GSMUA_Achr8P20810_001 | Banana | nucleus | 41.81 | 38.4 |
GSMUA_Achr10P... | Banana | cytosol, plastid | 5.69 | 36.96 |
Bra006218.1-P | Field mustard | mitochondrion | 37.79 | 36.93 |
Bra038729.1-P | Field mustard | nucleus | 37.63 | 36.89 |
Bra034751.1-P | Field mustard | nucleus | 36.62 | 36.08 |
GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 42.47 | 35.67 |
Bra023437.1-P | Field mustard | nucleus | 33.95 | 35.49 |
GSMUA_Achr7P15090_001 | Banana | nucleus | 40.64 | 35.06 |
GSMUA_Achr9P03910_001 | Banana | mitochondrion, nucleus | 37.79 | 35.04 |
KXG39691 | Sorghum | nucleus, plastid | 41.3 | 34.99 |
TraesCS4D01G208600.1 | Wheat | nucleus | 40.13 | 34.73 |
TraesCS4A01G096700.1 | Wheat | nucleus | 40.13 | 34.73 |
HORVU4Hr1G059800.2 | Barley | nucleus | 40.13 | 34.73 |
Os03t0274300-01 | Rice | nucleus | 40.13 | 34.68 |
TraesCS4B01G207700.1 | Wheat | nucleus | 40.13 | 34.68 |
Bra008800.1-P | Field mustard | nucleus | 33.61 | 33.9 |
TraesCS3D01G533700.1 | Wheat | nucleus, plastid | 34.45 | 31.69 |
TraesCS3A01G528500.1 | Wheat | nucleus, plastid | 34.45 | 31.64 |
HORVU3Hr1G115540.2 | Barley | nucleus, plastid | 34.62 | 31.46 |
Zm00001d047808_P001 | Maize | nucleus, plastid | 38.96 | 31.19 |
TraesCS3B01G597500.1 | Wheat | nucleus, plastid | 33.95 | 31.18 |
Zm00001d028608_P006 | Maize | nucleus | 35.62 | 30.6 |
EES10985 | Sorghum | mitochondrion | 31.94 | 29.38 |
TraesCS6D01G378100.1 | Wheat | nucleus | 26.92 | 23.99 |
TraesCS6A01G392300.1 | Wheat | nucleus | 26.76 | 23.84 |
TraesCS6B01G432500.1 | Wheat | nucleus | 26.76 | 23.84 |
HORVU6Hr1G091110.8 | Barley | cytosol, nucleus, plastid | 23.58 | 18.15 |
Zm00001d025679_P001 | Maize | cytosol, nucleus, plastid | 26.76 | 17.64 |
Os02t0817800-03 | Rice | nucleus | 12.21 | 11.53 |
Protein Annotations
EnsemblPlants:Bra015585.1 | EnsemblPlants:Bra015585.1-P | EnsemblPlantsGene:Bra015585 | Gene3D:1.10.246.220 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
PANTHER:PTHR21717 | PANTHER:PTHR21717:SF38 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
UniParc:UPI0002544BCD | UniProt:M4DGG1 | MapMan:15.5.2.2 | : | : | : |
Description
AT1G07540 (E=2e-233) TRFL2 | TRFL2 (TRF-LIKE 2); DNA binding
Coordinates
chrA10:+:859437..861942
Molecular Weight (calculated)
66928.7 Da
IEP (calculated)
9.990
GRAVY (calculated)
-0.673
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLQRRLDHG FNGYEVPPTP RATRSPRKSA FKKNQISSFD LLAAVAGDLL LESGGNSSSS SNNAIGDTNE EDQCAVKTKP HQTVVEEINC DHIHDNDAER
101: RFFVSEILPK THRSPSPPKD FHFGSTSGIT SDSSEKLGTQ GLGQSVCFRS ETNDKISMHG RLINDCEPEL SRDIIAENKH HIGSGFKKPV PPPVCSDDID
201: LLNDDGENFS ARYTTKTFRS TLRIGDRRIK KVLASKYCKL SSKQKETTVT NSDMDLKPSY YNKKHCLKSF RSERRYPIKK RRYFDGYTAS QSEETPKRGS
301: AFMSTIACQK QPALQSRDSH VKLGIKSFKV PELFIEIPET ATVGSLKRTV LEAVTTILEG GLRIGVLVHG KKVRDDSKML LQNGISLDTL SDTLGFCLEP
401: NPPHSTKPLA PEDSDCLRPF NVPHTLTRCL ASQGKHAKPS NSVESDLDSK PSAHNRAKPV YSRALIPVAP PLHAQALNVV PPRKPKRSEV AQRRIRRPFS
501: VAEVEVLVQA VERLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR ISPQQRRGEP VPQELLDRVL MAHAYWSQQQ GKQQLLEGHQ KLETSLGL
101: RFFVSEILPK THRSPSPPKD FHFGSTSGIT SDSSEKLGTQ GLGQSVCFRS ETNDKISMHG RLINDCEPEL SRDIIAENKH HIGSGFKKPV PPPVCSDDID
201: LLNDDGENFS ARYTTKTFRS TLRIGDRRIK KVLASKYCKL SSKQKETTVT NSDMDLKPSY YNKKHCLKSF RSERRYPIKK RRYFDGYTAS QSEETPKRGS
301: AFMSTIACQK QPALQSRDSH VKLGIKSFKV PELFIEIPET ATVGSLKRTV LEAVTTILEG GLRIGVLVHG KKVRDDSKML LQNGISLDTL SDTLGFCLEP
401: NPPHSTKPLA PEDSDCLRPF NVPHTLTRCL ASQGKHAKPS NSVESDLDSK PSAHNRAKPV YSRALIPVAP PLHAQALNVV PPRKPKRSEV AQRRIRRPFS
501: VAEVEVLVQA VERLGTGRWR DVKLRAFDNA KHRTYVDLKD KWKTLVHTAR ISPQQRRGEP VPQELLDRVL MAHAYWSQQQ GKQQLLEGHQ KLETSLGL
001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL
Arabidopsis Description
TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.