Factsheet for GSMUA_Achr10P22620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P20810_001	Banana	nucleus	60.81	66.51
GSMUA_Achr7P15090_001	Banana	nucleus	59.83	61.47
GSMUA_Achr9P03910_001	Banana	mitochondrion, nucleus	47.89	52.87
VIT_06s0004g04940.t01	Wine grape	nucleus	44.94	45.98
Os03t0274300-01	Rice	nucleus	43.4	44.65
KXG39691	Sorghum	nucleus, plastid	43.54	43.91
AT5G59430.2	Thale cress	nucleus	34.69	42.73
AT1G07540.1	Thale cress	nucleus	37.78	42.7
HORVU4Hr1G059800.2	Barley	nucleus	41.43	42.69
Solyc06g005590.2.1	Tomato	nucleus	41.29	42.67
TraesCS4B01G207700.1	Wheat	nucleus	41.43	42.63
CDY06712	Canola	nucleus	35.67	42.62
PGSC0003DMT400005476	Potato	nucleus	41.29	42.49
Bra015585.1-P	Field mustard	nucleus	35.67	42.47
TraesCS4A01G096700.1	Wheat	nucleus	41.01	42.26
TraesCS4D01G208600.1	Wheat	nucleus	41.01	42.26
AT3G46590.2	Thale cress	nucleus	32.72	42.13
VIT_13s0019g01670.t01	Wine grape	nucleus, plastid	41.57	42.05
CDY10282	Canola	nucleus	35.11	41.67
PGSC0003DMT400077969	Potato	nucleus	40.45	41.44
CDY15617	Canola	nucleus	34.27	41.36
Bra030689.1-P	Field mustard	nucleus	34.83	40.86
KRH29783	Soybean	nucleus	39.47	40.72
Bra002566.1-P	Field mustard	nucleus	32.3	40.42
Solyc06g076270.2.1	Tomato	nucleus	39.61	40.29
VIT_08s0007g00500.t01	Wine grape	nucleus	38.48	39.88
KRH24782	Soybean	nucleus	35.11	39.81
KRG99966	Soybean	nucleus	33.71	39.8
KRH30983	Soybean	nucleus	37.78	39.62
TraesCS3A01G528500.1	Wheat	nucleus, plastid	36.1	39.48
KRH49110	Soybean	nucleus	33.57	39.44
TraesCS3D01G533700.1	Wheat	nucleus, plastid	35.96	39.38
KRG97906	Soybean	nucleus	37.22	39.32
GSMUA_Achr10P...	Banana	cytosol, plastid	5.06	39.13
Solyc05g054410.2.1	Tomato	nucleus	37.64	38.9
Zm00001d047808_P001	Maize	nucleus, plastid	40.73	38.82
Zm00001d028608_P006	Maize	nucleus	37.92	38.79
TraesCS3B01G597500.1	Wheat	nucleus, plastid	35.39	38.71
HORVU3Hr1G115540.2	Barley	nucleus, plastid	35.53	38.45
PGSC0003DMT400060234	Potato	nucleus	36.94	38.17
KRH23087	Soybean	nucleus	38.34	38.02
KRH10245	Soybean	nucleus	38.06	37.64
CDX86474	Canola	nucleus	29.35	37.52
EES10985	Sorghum	mitochondrion	34.13	37.38
Solyc04g011650.2.1	Tomato	nucleus	34.97	37.33
PGSC0003DMT400016260	Potato	nucleus	35.11	37.31
Solyc12g027690.1.1	Tomato	extracellular	6.88	31.61
TraesCS6B01G432500.1	Wheat	nucleus	28.23	29.96
TraesCS6D01G378100.1	Wheat	nucleus	28.09	29.81
TraesCS6A01G392300.1	Wheat	nucleus	27.95	29.66
CDX80268	Canola	nucleus	32.02	27.54
CDY33039	Canola	nucleus	31.88	27.45
Solyc12g027710.1.1	Tomato	cytosol	8.71	25.62
Zm00001d025679_P001	Maize	cytosol, nucleus, plastid	28.93	22.71
HORVU6Hr1G091110.8	Barley	cytosol, nucleus, plastid	24.58	22.52
Os02t0817800-03	Rice	nucleus	14.19	15.96

Protein Annotations

Gene3D:1.10.246.220	MapMan:15.5.2.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr10G22620_001	EnsemblPlants:GSMUA_Achr10P22620_001	EnsemblPlants:GSMUA_Achr10T22620_001	InterPro:Homeobox-like_sf	InterPro:IPR000626
InterPro:IPR017930	UniProt:M0RKI7	InterPro:Myb_dom	PFscan:PS50053	PFscan:PS51294	PANTHER:PTHR21717
PANTHER:PTHR21717:SF38	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	SUPFAM:SSF54236	UniParc:UPI000294E883
InterPro:Ubiquitin-like_domsf	InterPro:Ubiquitin_dom	SEG:seg	:	:	:

Description

Putative Telomere repeat-binding protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22620_001]

Coordinates

chr10:+:27743457..27751009

Molecular Weight (calculated)

78222.6 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.545

Length

712 amino acids

Sequence
(BLAST)

001: MHVDLRFASC LPLPRPCGDE EPEFWRFDGN LRSLRGSHSH PVLEVAQFHL VISHWDMVLQ RRLDCGSSGY HAPVMPHVPR SARGKRSIRK KVEGKPLCAF
101: DLLATVAGKL LSERENSLAS CDNTGTSDPA AAKDTIKREQ IDSNERSIKF EAFDLLSCNE HPKSSKATSS GPTSPIVKSE ISDEDAVGGE SKFIEDSHKI
201: GYGSKKLPQG QQQTAGNATD GNALYRLDGL VDLDAKHSVL GSSDSSVEVP LHRNNIYRNT LLPKQEDGMD LAACNDDDEN SSGCTHPTVV TNKTSRMQHI
301: GDRRIRKLLA SKFWRVAPTM LQDSETSNYD VEQKHALQGK RMCYTRQRTQ RNSSKRRKLF DRCSVSVCGG GIYDEDVSNL CENGGIKLET YDSQGNLCEA
401: NGASSTTTGQ KSCYESPEYH VKLSIKSFKV PELVIEIPET ATVGSLKRTV LDAVTAILGG GLCVGVLLQG KKVRDDNKTL HQVGISHGDK LDNLGFTLEP
501: NPRQSPAPLT SSEDPNFLSI GCAPEPLDRI SPVAPAVVDQ GGPDATQFLQ ICPESDHDSV PSPTDAASSL EKTKANSLAL VAVPPMDTEA LAMVPLRNKP
601: KRSEATQRRV RRPFSVAEVE ALVQAVEKLG TGRWRDVKLC AFENAKHRTY VDLKDKWKTL VHTARISPQQ RRGEPVPQEL LDRVLSAQAY WSQQQAKLLL
701: KPPASAETRL LL

Best Arabidopsis Sequence Match ( AT1G07540.1 )
(BLAST)

001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL

Arabidopsis Description

TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.