CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99966	Soybean	nucleus	83.33	83.75
GSMUA_Achr8P20810_001	Banana	nucleus	41.58	38.71
VIT_08s0007g00500.t01	Wine grape	nucleus	42.41	37.41
GSMUA_Achr9P03910_001	Banana	mitochondrion, nucleus	37.79	35.5
KRG97906	Soybean	nucleus	38.78	34.87
GSMUA_Achr7P15090_001	Banana	nucleus	39.44	34.49
KRH30983	Soybean	nucleus	38.61	34.46
KRH29783	Soybean	nucleus	38.61	33.91
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	39.44	33.57
KRH23087	Soybean	nucleus	39.6	33.43
KRH10245	Soybean	nucleus	39.11	32.92
Os03t0274300-01	Rice	nucleus	37.29	32.66
KRH24782	Soybean	nucleus	33.5	32.32
KXG39691	Sorghum	nucleus, plastid	37.62	32.29
HORVU4Hr1G059800.2	Barley	nucleus	35.31	30.97
TraesCS4B01G207700.1	Wheat	nucleus	35.15	30.78
TraesCS4A01G096700.1	Wheat	nucleus	34.98	30.68
TraesCS4D01G208600.1	Wheat	nucleus	34.82	30.54
TraesCS3D01G533700.1	Wheat	nucleus, plastid	31.85	29.69
TraesCS3A01G528500.1	Wheat	nucleus, plastid	31.68	29.49
GSMUA_Achr10P...	Banana	cytosol, plastid	4.46	29.35
TraesCS3B01G597500.1	Wheat	nucleus, plastid	31.52	29.34
HORVU3Hr1G115540.2	Barley	nucleus, plastid	31.85	29.33
Zm00001d047808_P001	Maize	nucleus, plastid	35.31	28.65
EES10985	Sorghum	mitochondrion	30.2	28.15
Zm00001d028608_P006	Maize	nucleus	32.18	28.02
TraesCS6D01G378100.1	Wheat	nucleus	26.57	23.99
TraesCS6B01G432500.1	Wheat	nucleus	26.24	23.7
TraesCS6A01G392300.1	Wheat	nucleus	25.91	23.4
HORVU6Hr1G091110.8	Barley	cytosol, nucleus, plastid	23.76	18.53
Zm00001d025679_P001	Maize	cytosol, nucleus, plastid	24.59	16.43
Os02t0817800-03	Rice	nucleus	11.22	10.74

Protein Annotations

Gene3D:1.10.246.220	EntrezGene:100807254	MapMan:15.5.2.2	EMBL:ACUP02004331	EnsemblPlantsGene:GLYMA_07G133000	GO:GO:0000783
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003691	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0031627	InterPro:Homeobox-like_sf	InterPro:IPR017930
UniProt:K7L1H0	EnsemblPlants:KRH49110	ProteinID:KRH49110	ProteinID:KRH49110.1	ProteinID:KRH49111.1	InterPro:Myb_dom
PFscan:PS51294	PANTHER:PTHR21717	PANTHER:PTHR21717:SF56	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
SUPFAM:SSF54236	UniParc:UPI00023383AF	InterPro:Ubiquitin-like_domsf	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:15743952..15749365

Molecular Weight (calculated)

68384.0 Da

IEP (calculated)

9.714

GRAVY (calculated)

-0.728

Length

606 amino acids

Sequence
(BLAST)

001: MVLQKRLNYG FNGYQVPVIP RASRSARGRG TIKKKPDNNQ IQAFEMLASV AGNFLQKNES SDPKNVVFVE DPCSFCGTNI KDKYEDERRS FMRDSFDHGA
101: CSEIASAFVP SMQGKHDNHR GMGDSSFLDN HLEGQGQNVL EREDERIKRR SVNGKTIHIK GCSDGLIEPC HKVSKHCSLA NNAEKPSLEC RKHLDSFPNG
201: FTSRKLVNRD DDENLVRCTQ LNSKNNNTSG APPDMPKLKD ASPIMSDENN SRDIFEFENL QRMYPFKKRK FFNQNSSSTS DRGSQCQGMF DSSDTTRVNG
301: TNHAIEESSS IVGQQAHSGS RACNVKLSIK SFKVPELFID IPETATIGSL KRTVMEAVTT ILGDELHVGI LLQGKKVRDD SKTLIQTGIS QDDKRHRLGF
401: MLEPRHTPIS PTSYNDDPCF LTTSSRKKLS RQSTSLTLQQ GTYNVSKERS MIKIESCAKG DLNIVSSLED TSTNNNMSKC RALVAVPAIN MEALAVVPFW
501: RKSGNPDFAQ RRIRRPFSVL EVEALVQAVE KLRTGRWRDV KQRAFDHAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLAA HAYWSQHQCK
601: HQLKPL

Best Arabidopsis Sequence Match ( AT1G07540.1 )
(BLAST)

001: MVLQKRPDYG FNGYEVPHTP RAARSPRKSA FKKKSENHQI SSFDLLAAVA GKLLLEGGNS SSSSNNTSGN NEDQCAVKKE PLNGGDIMVE EETTNSDHDN
101: NNAERSFFVS EILQKSHEMQ SFNRSPSPLK EFHFGSSSGI TSDSSEKFET QELAYDESKI NNGDCYRSES NDKKSMLGGL NFEAKLSRNV VGKDEKHIGS
201: GFRKPIPQNP STCSDDVDLH GKENDDGENF SACYRTKSFR STLRIGDRRI RKVWASKYCK VPPKLKDTTV TNSDLDLKSD YYSKKHCLKS LRSERNYPIK
301: KRRYFDGYTA SQSEETNKNE GQSGSPRKAS AFLSSIACQK QPAAFQSPRD SNNVKLGIKS FRVPELFIEI PETATVGSLK RTVLEAVTSI LGGGLRIGVL
401: VHGKKVRDDS KMLLQTGLSL DTLSDTLGFC LEPNPPQSTK PLSPEDSDFA RPCNVPHTLT RCLPSPGKHA KPSNSVESDL DSKPSAPNRG KTIYSRALIP
501: VSPLHAQALT VVPPRKTKRS EVAQRRIRRP FSVAEVEALV QAVERLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR
601: VLTAHAYWSQ QQGKHQLLEG PQQLETSLGL

Arabidopsis Description

TRP5Telomere repeat-binding protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q6R0E3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.