Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g027710.1.1 | Tomato | cytosol | 46.45 | 29.75 |
| Solyc06g005590.2.1 | Tomato | nucleus | 46.45 | 10.45 |
| Solyc06g076270.2.1 | Tomato | nucleus | 41.29 | 9.14 |
| GSMUA_Achr9P03910_001 | Banana | mitochondrion, nucleus | 32.26 | 7.75 |
| GSMUA_Achr8P20810_001 | Banana | nucleus | 32.26 | 7.68 |
| Solyc05g054410.2.1 | Tomato | nucleus | 33.55 | 7.55 |
| Os03t0274300-01 | Rice | nucleus | 33.55 | 7.51 |
| Zm00001d028608_P006 | Maize | nucleus | 33.55 | 7.47 |
| KXG39691 | Sorghum | nucleus, plastid | 32.9 | 7.22 |
| Solyc04g011650.2.1 | Tomato | nucleus | 30.32 | 7.05 |
| TraesCS4D01G208600.1 | Wheat | nucleus | 30.97 | 6.95 |
| HORVU4Hr1G059800.2 | Barley | nucleus | 30.97 | 6.95 |
| TraesCS4A01G096700.1 | Wheat | nucleus | 30.97 | 6.95 |
| TraesCS4B01G207700.1 | Wheat | nucleus | 30.97 | 6.94 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 31.61 | 6.88 |
| Zm00001d047808_P001 | Maize | nucleus, plastid | 30.32 | 6.29 |
| EES10985 | Sorghum | mitochondrion | 25.81 | 6.15 |
| GSMUA_Achr7P15090_001 | Banana | nucleus | 27.1 | 6.06 |
| TraesCS6A01G392300.1 | Wheat | nucleus | 23.87 | 5.51 |
| TraesCS6B01G432500.1 | Wheat | nucleus | 23.87 | 5.51 |
| TraesCS3D01G533700.1 | Wheat | nucleus, plastid | 22.58 | 5.38 |
| TraesCS3A01G528500.1 | Wheat | nucleus, plastid | 22.58 | 5.38 |
| TraesCS3B01G597500.1 | Wheat | nucleus, plastid | 22.58 | 5.38 |
| TraesCS6D01G378100.1 | Wheat | nucleus | 23.23 | 5.37 |
| HORVU3Hr1G115540.2 | Barley | nucleus, plastid | 22.58 | 5.32 |
| HORVU6Hr1G091110.8 | Barley | cytosol, nucleus, plastid | 22.58 | 4.5 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 2.58 | 4.35 |
| Zm00001d025679_P001 | Maize | cytosol, nucleus, plastid | 25.16 | 4.3 |
| Os02t0817800-03 | Rice | nucleus | 8.39 | 2.05 |
Protein Annotations
| MapMan:35.2 | GO:GO:0000783 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003691 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0031627 |
| UniProt:K4DDT7 | PANTHER:PTHR21717 | PANTHER:PTHR21717:SF38 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc12g027690.1 | EnsemblPlants:Solyc12g027690.1.1 |
| UniParc:UPI0002769B69 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr12:+:25760929..25761514
Molecular Weight (calculated)
17201.5 Da
IEP (calculated)
7.095
GRAVY (calculated)
-0.039
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MLYPVHLNNV LTAVLLLNHC FSLSDSNIFA LYDSNTLLRT VMEAKTEILD GGLWICVVFQ SNKVRDDNKT LLHAGISHDD NFDALGFSLK PQPSRVSPPL
101: GPQGRSHVLP CETPQPLTSL ILHFCFQSNS SSYRTYTSSP TSIFLSRTGD RACFP
101: GPQGRSHVLP CETPQPLTSL ILHFCFQSNS SSYRTYTSSP TSIFLSRTGD RACFP
001: MVFKRKLDCL SVGFDFPNIP RAPRSCRRKV LNKRIDHDDD NTQICAIDLL ALAGKILQES ESSSASSNAF EEIKQEKVEN CKTIKSESSD QGNSVSKPTY
101: DISTEKCVVN SCFSFPDSDG VLERTPMSDY KKIHGLMDVG CENKNVNNGF EQGEATDRVG DGGLVTDTCN LEDATALGLQ FPKSVCVGGD LKSPSTLDMT
201: PNGSYARHGN HTNLGRKDDD EKFYSYHKLS NKFKSYRSPT IRRIRKSMSS KYWKQVPKDF GYSRADVGVK TLYRKRKSCY GYNAWQREII YKRRRSPDRS
301: SVVTSDGGLS SGSVSKLPKK GDTVKLSIKS FRIPELFIEV PETATVGSLK RTVMEAVSVL LSGGIRVGVL MHGKKVRDER KTLSQTGISC DENLDNLGFT
401: LEPSPSKVPL PLCSEDPAVP TDPTSLSERS AASPMLDSGI PHADDVIDSR NIVDSNLELV PYQGDISVDE PSSDSKELVP LPELEVKALA IVPLNQKPKR
501: TELAQRRTRR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF EDADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLRAYGYWS QHQGKHQARG
601: ASKDPDMNRG GAFESGVSV
101: DISTEKCVVN SCFSFPDSDG VLERTPMSDY KKIHGLMDVG CENKNVNNGF EQGEATDRVG DGGLVTDTCN LEDATALGLQ FPKSVCVGGD LKSPSTLDMT
201: PNGSYARHGN HTNLGRKDDD EKFYSYHKLS NKFKSYRSPT IRRIRKSMSS KYWKQVPKDF GYSRADVGVK TLYRKRKSCY GYNAWQREII YKRRRSPDRS
301: SVVTSDGGLS SGSVSKLPKK GDTVKLSIKS FRIPELFIEV PETATVGSLK RTVMEAVSVL LSGGIRVGVL MHGKKVRDER KTLSQTGISC DENLDNLGFT
401: LEPSPSKVPL PLCSEDPAVP TDPTSLSERS AASPMLDSGI PHADDVIDSR NIVDSNLELV PYQGDISVDE PSSDSKELVP LPELEVKALA IVPLNQKPKR
501: TELAQRRTRR PFSVTEVEAL VQAVEELGTG RWRDVKLRAF EDADHRTYVD LKDKWKTLVH TASISPQQRR GEPVPQELLD RVLRAYGYWS QHQGKHQARG
601: ASKDPDMNRG GAFESGVSV
Arabidopsis Description
TRP3Telomere repeat-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7B1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.