CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27099	Soybean	cytosol, mitochondrion, nucleus	18.93	17.33
CDY68274	Canola	cytosol, nucleus	14.56	14.71
VIT_19s0014g05210.t01	Wine grape	plastid	24.27	13.51
Solyc07g064090.2.1	Tomato	nucleus	23.3	12.9
GSMUA_Achr5P26370_001	Banana	cytosol	22.82	12.77
PGSC0003DMT400049479	Potato	cytosol	22.82	12.63
Os08t0137100-01	Rice	cytosol	22.82	12.5
CDY53612	Canola	plastid	22.33	12.47
CDY27567	Canola	plastid	21.84	12.2
KRH71526	Soybean	cytosol	22.33	12.07
KRH22237	Soybean	cytosol	22.33	11.95
Zm00001d024698_P002	Maize	cytosol	21.84	11.87
KRH31935	Soybean	cytosol	21.84	11.78
CDY19611	Canola	plastid	20.87	11.32
CDY56255	Canola	cytosol	21.36	11.2
CDY06378	Canola	mitochondrion	14.56	11.15
TraesCS7A01G089100.1	Wheat	cytosol	20.39	11.08
TraesCS4A01G388400.1	Wheat	cytosol, plastid	19.9	10.85
Os08t0137250-01	Rice	cytosol	23.79	10.52
CDY19607	Canola	cytosol, nucleus, plastid	18.93	9.9
TraesCS7A01G089200.1	Wheat	cytoskeleton, cytosol, nucleus, plastid	20.87	9.45
CDY19610	Canola	cytoskeleton, cytosol, nucleus	13.59	9.4
EES13318	Sorghum	mitochondrion	20.39	9.35
OQU79846	Sorghum	plastid	22.33	9.35
HORVU7Hr1G073410.1	Barley	cytosol	21.36	9.24
TraesCS7A01G308300.1	Wheat	nucleus, plastid	20.87	9.09
TraesCS7D01G084500.1	Wheat	plastid	19.9	9.01
TraesCS7D01G305100.1	Wheat	nucleus, plastid	20.87	8.87
Zm00001d049608_P001	Maize	mitochondrion	19.42	8.68

Protein Annotations

EnsemblPlants:CDY10986	EnsemblPlantsGene:GSBRNA2T00048931001	Gene3D:2.130.10.10	GO:A0A078FCB2	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR015943	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat_dom_sf	ProteinID:CDY10986	ProteinID:CDY10986.1	SEG:seg	SUPFAM:SSF50978	TMHMM:TMhelix
UniParc:UPI0004EE153F	UniProt:A0A078FCB2	MapMan:35.2	:	:	:

Description

BnaA03g46450DBnaA03g46450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCB2]

Coordinates

chrLK032008:+:523409..524645

Molecular Weight (calculated)

23767.2 Da

IEP (calculated)

5.281

GRAVY (calculated)

0.315

Length

206 amino acids

Sequence
(BLAST)

001: MKVYVLCFCS HGFIWLLQER IIIVLFRLEE VYLQLFLCLN FMIMATAQVT EKEMNPKDDD QYKPVETGLQ FKSYIDDKVV ESFLAVNWAV KDDTHYILVG
101: RLMCIIQCFS CLIFDLQTLC GHDDSINDIQ CSPYDDALVV SASEDKTVQC ILFSVLLLVV TDFFQSFFSF FVVRTNFTSS ILGTMKLKSG LRKITRPKKE
201: NRLASP

Best Arabidopsis Sequence Match ( AT3G20740.1 )
(BLAST)

001: MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY
101: VAAGGVKGII RVIDVNSETI HKSLVGHGDS VNEIRTQPLK PQLVITASKD ESVRLWNVET GICILIFAGA GGHRYEVLSV DFHPSDIYRF ASCGMDTTIK
201: IWSMKEFWTY VEKSFTWTDD PSKFPTKFVQ FPVFTASIHT NYVDCNRWFG DFILSKSVDN EILLWEPQLK ENSPGEGASD VLLRYPVPMC DIWFIKFSCD
301: LHLSSVAIGN QEGKVYVWDL KSCPPVLITK LSHNQSKSVI RQTAMSVDGS TILACCEDGT IWRWDVITK

Arabidopsis Description

FIEPolycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Source:UniProtKB/Swiss-Prot;Acc:Q9LT47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.