CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06378	Canola	mitochondrion	58.12	85.13
CDY19611	Canola	plastid	78.93	81.84
CDY27567	Canola	plastid	75.63	80.76
CDY53612	Canola	plastid	75.38	80.49
CDY56255	Canola	cytosol	78.43	78.63
VIT_19s0014g05210.t01	Wine grape	plastid	64.21	68.38
CDY68274	Canola	cytosol, nucleus	34.26	66.18
Solyc07g064090.2.1	Tomato	nucleus	61.68	65.32
PGSC0003DMT400049479	Potato	cytosol	61.68	65.32
GSMUA_Achr5P26370_001	Banana	cytosol	60.91	65.22
KRH31935	Soybean	cytosol	62.44	64.4
KRH71526	Soybean	cytosol	61.93	64.04
Zm00001d024698_P002	Maize	cytosol	60.41	62.8
Os08t0137100-01	Rice	cytosol	59.14	61.97
KRH22237	Soybean	cytosol	60.15	61.56
CDY19610	Canola	cytoskeleton, cytosol, nucleus	44.92	59.4
KRH27099	Soybean	cytosol, mitochondrion, nucleus	33.5	58.67
TraesCS7A01G089100.1	Wheat	cytosol	53.55	55.67
TraesCS4A01G388400.1	Wheat	cytosol, plastid	52.79	55.03
TraesCS7A01G308300.1	Wheat	nucleus, plastid	58.63	48.84
OQU79846	Sorghum	plastid	60.41	48.37
HORVU7Hr1G073410.1	Barley	cytosol	57.61	47.69
TraesCS7D01G305100.1	Wheat	nucleus, plastid	58.63	47.63
TraesCS7A01G089200.1	Wheat	cytoskeleton, cytosol, nucleus, plastid	53.05	45.93
TraesCS7D01G084500.1	Wheat	plastid	53.05	45.93
EES13318	Sorghum	mitochondrion	51.27	44.99
Os08t0137250-01	Rice	cytosol	52.79	44.64
Zm00001d049608_P001	Maize	mitochondrion	50.76	43.38
CDY10986	Canola	extracellular	9.9	18.93

Protein Annotations

MapMan:12.3.3.1.1.2	Gene3D:2.130.10.10	UniProt:A0A078G3N8	EnsemblPlants:CDY19607	ProteinID:CDY19607	ProteinID:CDY19607.1
InterPro:G-protein_beta_WD-40_rep	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016043	GO:GO:0016571	GO:GO:0019538	GO:GO:0035098	EnsemblPlantsGene:GSBRNA2T00009273001
InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF00400	PRINTS:PR00320	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR10253	PANTHER:PTHR10253:SF5	InterPro:Polycomb_EED	SMART:SM00320
SUPFAM:SSF50978	UniParc:UPI0004EDD973	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom
InterPro:WD40_repeat_dom_sf	:	:	:	:	:

Description

BnaA05g20150DBnaA05g20150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3N8]

Coordinates

chrLK032098:+:479866..482401

Molecular Weight (calculated)

44180.5 Da

IEP (calculated)

5.678

GRAVY (calculated)

-0.235

Length

394 amino acids

Sequence
(BLAST)

001: MSKITLGNES LVGSLTPSNK KSYKLTNKIQ EGKTPLYSVA FNFIDARYFT CFVSAGGNGI NLYNCLEDGS ISLLYAFADE DKEEEFNTAS WACGVEGNPF
101: VVAGGEKGII RVIDVNNEKI HKSLVGHGDL VNEIRTQPLK PQLVLSASKD ESVRLWNVET GICILIFAGS GGHRNEVISV DFHPSDKHRF VSCGMDTTVK
201: IWSMKEFWTY VEKSFTWKDD PSKFPTKFVE LPVFTASVHT DFVDCNRWVG DFILSKSDEI LLWEPILKEN SPGEGTSDVL LRYPIPNCNL WFIKFSCDLS
301: LNYLSIGNEE GKIYVWDLKS CPPVLVTVLS HNQSKSVIRQ TAMSTDGNTI LAASEDGTIW RWDAINKEQA VTVEAQPPPI LHQYRRREGK SQLK

Best Arabidopsis Sequence Match ( AT3G20740.1 )
(BLAST)

001: MSKITLGNES IVGSLTPSNK KSYKVTNRIQ EGKKPLYAVV FNFLDARFFD VFVTAGGNRI TLYNCLGDGA ISALQSYADE DKEESFYTVS WACGVNGNPY
101: VAAGGVKGII RVIDVNSETI HKSLVGHGDS VNEIRTQPLK PQLVITASKD ESVRLWNVET GICILIFAGA GGHRYEVLSV DFHPSDIYRF ASCGMDTTIK
201: IWSMKEFWTY VEKSFTWTDD PSKFPTKFVQ FPVFTASIHT NYVDCNRWFG DFILSKSVDN EILLWEPQLK ENSPGEGASD VLLRYPVPMC DIWFIKFSCD
301: LHLSSVAIGN QEGKVYVWDL KSCPPVLITK LSHNQSKSVI RQTAMSVDGS TILACCEDGT IWRWDVITK

Arabidopsis Description

FIEPolycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Source:UniProtKB/Swiss-Prot;Acc:Q9LT47]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.