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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d030079_P001 Maize cytosol, nucleus, plastid 70.25 93.41
Os10t0575950-01 Rice cytosol 69.42 84.85
TraesCS1A01G193900.1 Wheat cytosol 70.25 83.33
TraesCS1D01G197800.1 Wheat cytosol 69.42 82.35
TraesCS1B01G208900.1 Wheat cytosol 69.42 82.35
OQU80353 Sorghum cytosol 63.64 79.38
HORVU1Hr1G050750.1 Barley cytosol, mitochondrion, plasma membrane 35.54 78.18
KXG34154 Sorghum cytosol 24.79 54.55
GSMUA_Achr5P14060_001 Banana nucleus 45.45 49.55
VIT_05s0124g00450.t01 Wine grape plastid 33.06 45.98
OQU76519 Sorghum extracellular 52.89 44.76
AT1G32310.1 Thale cress cytosol 34.71 42.0
KXG30734 Sorghum extracellular 53.72 40.88
Solyc08g076580.2.1 Tomato cytosol 38.02 40.71
Bra040769.1-P Field mustard cytosol 33.06 40.4
PGSC0003DMT400038358 Potato plastid 35.54 40.19
CDY61823 Canola cytosol 34.71 38.53
KRH39569 Soybean cytosol, plastid 35.54 38.39
CDY32305 Canola cytosol 33.88 37.61
KRH74384 Soybean cytosol, plastid 34.71 36.84
Protein Annotations
EnsemblPlants:EER94435EnsemblPlantsGene:SORBI_3001G286300EntrezGene:8055596GO:GO:0003674GO:GO:0005488GO:GO:0008150
GO:GO:0010997GO:GO:0040007GO:GO:0046621InterPro:SAMBAncoils:CoilPANTHER:PTHR37387
ProteinID:EER94435ProteinID:EER94435.2SEG:segUniParc:UPI00081AD799UniProt:C5WQQ7MapMan:35.2
Description
hypothetical protein
Coordinates
chr1:+:56069270..56072188
Molecular Weight (calculated)
13349.7 Da
IEP (calculated)
10.016
GRAVY (calculated)
-0.626
Length
121 amino acids
Sequence
(BLAST)
001: MSSPARSTVS AASGGAVSAA EDVADFIDAL YRKDEAMAEL KSEVMEALQR EVRSLDDDSW MFAAPRSRIN LVSRPGKKRT QQQQGILPQN SCRTWFSGAY
101: LPKQHGKLSE LGQASKKTRN F
Best Arabidopsis Sequence Match ( AT1G32310.1 )
(BLAST)
1: MNGASPAHSL VSTTAVAGGG GSSGAAAGLD DFHFPPDIPS MQERKDEAMR VLKADLMTEL DKEVKSLEED SWMFEGPRSR IHLISRRGNF LKKGGEVKLW
Arabidopsis Description
SAMBAProtein SAMBA [Source:UniProtKB/Swiss-Prot;Acc:Q9C613]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.